RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 ADAM2Q99965 735 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 PLVAPQ9BX97 442 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 NRBP2Q9NSY0 501 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 KCNJ14Q9UNX9 436 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 PCDHB7Q9Y5E2 793 aa25.18■■□□□ 1.62
MSH6-202ENST00000411819 BDP1A6H8Y1 2624 aa25.17■■□□□ 1.62
MSH6-202ENST00000411819 TMOD1P28289 359 aa25.17■■□□□ 1.62
MSH6-202ENST00000411819 NPY5RQ15761 445 aa25.17■■□□□ 1.62
MSH6-202ENST00000411819 FAM177A1Q8N128 213 aaPredicted RBP25.17■■□□□ 1.62
MSH6-202ENST00000411819 ALG13Q9NP73 1137 aaKnown RBP25.17■■□□□ 1.62
MSH6-202ENST00000411819 C1orf112Q9NSG2 853 aa25.17■■□□□ 1.62
MSH6-202ENST00000411819 H3BQ06 376 aaPredicted RBP25.16■■□□□ 1.62
MSH6-202ENST00000411819 M0R2N6 131 aa25.16■■□□□ 1.62
MSH6-202ENST00000411819 GPR32O75388 356 aa25.16■■□□□ 1.62
MSH6-202ENST00000411819 PSMD10O75832 226 aa25.16■■□□□ 1.62
MSH6-202ENST00000411819 INF2Q27J81 1249 aa25.16■■□□□ 1.62
MSH6-202ENST00000411819 FNDC1Q4ZHG4 1894 aaPredicted RBP25.16■■□□□ 1.62
MSH6-202ENST00000411819 KRT25Q7Z3Z0 450 aa25.16■■□□□ 1.62
MSH6-202ENST00000411819 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.16■■□□□ 1.62
MSH6-202ENST00000411819 PABPC5Q96DU9 382 aaKnown RBP25.16■■□□□ 1.62
MSH6-202ENST00000411819 SCLT1Q96NL6 688 aa25.16■■□□□ 1.62
MSH6-202ENST00000411819 RGS18Q9NS28 235 aa25.16■■□□□ 1.62
MSH6-202ENST00000411819 CLDND1Q9NY35 253 aa25.16■■□□□ 1.62
MSH6-202ENST00000411819 MMP1P03956 469 aa25.15■■□□□ 1.62
MSH6-202ENST00000411819 XBP1P17861 261 aa25.15■■□□□ 1.62
MSH6-202ENST00000411819 NLRP11P59045 1033 aaKnown RBP25.15■■□□□ 1.62
MSH6-202ENST00000411819 TBC1D8BQ0IIM8 1120 aa25.15■■□□□ 1.62
MSH6-202ENST00000411819 SPOUT1Q5T280 376 aaKnown RBP25.15■■□□□ 1.62
MSH6-202ENST00000411819 PTCRAQ6ISU1 281 aaPredicted RBP25.15■■□□□ 1.62
MSH6-202ENST00000411819 SLC24A5Q71RS6 500 aa25.15■■□□□ 1.62
MSH6-202ENST00000411819 RDM1Q8NG50 284 aa25.15■■□□□ 1.62
MSH6-202ENST00000411819 P2RX5Q93086 422 aa25.15■■□□□ 1.62
MSH6-202ENST00000411819 ZNF668Q96K58 619 aaPredicted RBP25.15■■□□□ 1.62
MSH6-202ENST00000411819 RNF216Q9NWF9 866 aaPredicted RBP25.15■■□□□ 1.62
MSH6-202ENST00000411819 SEPT9Q9UHD8 586 aaPredicted RBP25.15■■□□□ 1.62
MSH6-202ENST00000411819 DDX25Q9UHL0 483 aaKnown RBP25.15■■□□□ 1.62
MSH6-202ENST00000411819 TPCN1Q9ULQ1 816 aa25.15■■□□□ 1.62
MSH6-202ENST00000411819 STK36Q9NRP7 1315 aa25.14■■□□□ 1.62
MSH6-202ENST00000411819 CYP3A7-CYP3A51PA0A087WV96 503 aa25.14■■□□□ 1.62
MSH6-202ENST00000411819 CCDC194A0A1B0GVG4 234 aa25.14■■□□□ 1.62
MSH6-202ENST00000411819 DTNBO60941 627 aa25.14■■□□□ 1.62
MSH6-202ENST00000411819 IL9P15248 144 aa25.14■■□□□ 1.62
MSH6-202ENST00000411819 CYP3A7P24462 503 aa25.14■■□□□ 1.62
MSH6-202ENST00000411819 LETM2Q2VYF4 491 aa25.14■■□□□ 1.62
MSH6-202ENST00000411819 MOXD1Q6UVY6 613 aa25.14■■□□□ 1.62
MSH6-202ENST00000411819 FAM43BQ6ZT52 329 aaPredicted RBP25.14■■□□□ 1.62
MSH6-202ENST00000411819 PLAGL2Q9UPG8 496 aa25.14■■□□□ 1.62
MSH6-202ENST00000411819 TBKBP1A7MCY6 615 aa25.13■■□□□ 1.61
MSH6-202ENST00000411819 C9IYK1 514 aa25.13■■□□□ 1.61
MSH6-202ENST00000411819 PFKFB2O60825 505 aa25.13■■□□□ 1.61
MSH6-202ENST00000411819 ANAPC15P60006 121 aa25.13■■□□□ 1.61
MSH6-202ENST00000411819 MTERF2Q49AM1 385 aa25.13■■□□□ 1.61
MSH6-202ENST00000411819 LINC01465Q8N7H1 131 aa25.13■■□□□ 1.61
MSH6-202ENST00000411819 ETNPPLQ8TBG4 499 aa25.13■■□□□ 1.61
MSH6-202ENST00000411819 NEK9Q8TD19 979 aa25.13■■□□□ 1.61
MSH6-202ENST00000411819 PHF20Q9BVI0 1012 aa25.13■■□□□ 1.61
MSH6-202ENST00000411819 SLC37A4O43826 429 aa25.12■■□□□ 1.61
MSH6-202ENST00000411819 ITGB1P05556 798 aa25.12■■□□□ 1.61
MSH6-202ENST00000411819 AK2P54819 239 aa25.12■■□□□ 1.61
MSH6-202ENST00000411819 ANKRD1Q15327 319 aa25.12■■□□□ 1.61
MSH6-202ENST00000411819 NAALADL2Q58DX5 795 aa25.12■■□□□ 1.61
MSH6-202ENST00000411819 KLHL23Q8NBE8 558 aa25.12■■□□□ 1.61
MSH6-202ENST00000411819 MBOAT7Q96N66 472 aa25.12■■□□□ 1.61
MSH6-202ENST00000411819 ATP6V0A4Q9HBG4 840 aa25.12■■□□□ 1.61
MSH6-202ENST00000411819 PLXNA4Q9HCM2 1894 aa25.12■■□□□ 1.61
MSH6-202ENST00000411819 HYAL1Q12794 435 aa25.11■■□□□ 1.61
MSH6-202ENST00000411819 PUS10Q3MIT2 529 aaKnown RBP25.11■■□□□ 1.61
MSH6-202ENST00000411819 XKR3Q5GH77 459 aa25.11■■□□□ 1.61
MSH6-202ENST00000411819 FAM102BQ5T8I3 360 aa25.11■■□□□ 1.61
MSH6-202ENST00000411819 NEK8Q86SG6 692 aa25.11■■□□□ 1.61
MSH6-202ENST00000411819 NLRP7Q8WX94 980 aa25.11■■□□□ 1.61
MSH6-202ENST00000411819 ADAMTS10Q9H324 1103 aa25.11■■□□□ 1.61
MSH6-202ENST00000411819 IGFLR1Q9H665 355 aa25.11■■□□□ 1.61
MSH6-202ENST00000411819 GJB4Q9NTQ9 266 aa25.11■■□□□ 1.61
MSH6-202ENST00000411819 TMEM150BA6NC51 233 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 NCK2O43639 380 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 FGFR1P11362 822 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 ZSCAN20P17040 1043 aaPredicted RBP25.1■■□□□ 1.61
MSH6-202ENST00000411819 EIF4BP23588 611 aaKnown RBP25.1■■□□□ 1.61
MSH6-202ENST00000411819 GPC3P51654 580 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 B3GNT9Q6UX72 402 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 POF1BQ8WVV4 589 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 PPP2R3CQ969Q6 453 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 SH2D3AQ9BRG2 576 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 C1QTNF1Q9BXJ1 281 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 TMEM161AQ9NX61 479 aa25.1■■□□□ 1.61
MSH6-202ENST00000411819 ORC3Q9UBD5 711 aaPredicted RBP25.1■■□□□ 1.61
MSH6-202ENST00000411819 GRXCR2A6NFK2 248 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 COL9A1P20849 921 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 DNAJB1P25685 340 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 SSTR3P32745 418 aaPredicted RBP25.09■■□□□ 1.61
MSH6-202ENST00000411819 DSC3Q14574 896 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 COL19A1Q14993 1142 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 PIK3AP1Q6ZUJ8 805 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 FAM178BQ8IXR5 827 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 ZNF710Q8N1W2 664 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 SPPL3Q8TCT6 385 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 AAASQ9NRG9 546 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 HCSTQ9UBK5 93 aa25.09■■□□□ 1.61
MSH6-202ENST00000411819 FAM50BQ9Y247 325 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms