RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ASTN1O14525 1302 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 USP27XA6NNY8 438 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 DKC1O60832 514 aaKnown RBP eCLIP15.53■□□□□ 0.08
LIMS2-206ENST00000409754 PRPF6O94906 941 aaKnown RBP15.53■□□□□ 0.08
LIMS2-206ENST00000409754 GCNT3O95395 438 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 EDNRBP24530 442 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 HOXD13P35453 343 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 FXR1P51114 621 aaKnown RBP eCLIP15.53■□□□□ 0.08
LIMS2-206ENST00000409754 PRKCZQ05513 592 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 UGCGQ16739 394 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 MORN1Q5T089 497 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 STXBP4Q6ZWJ1 553 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 FAM133AQ8N9E0 248 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 RETREG2Q8NC44 543 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 SHCBP1Q8NEM2 672 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 CPLX3Q8WVH0 158 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 IQCDQ96DY2 449 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 FIZ1Q96SL8 496 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 NDST4Q9H3R1 872 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 JPH1Q9HDC5 661 aaPredicted RBP15.53■□□□□ 0.08
LIMS2-206ENST00000409754 TYW1Q9NV66 732 aaKnown RBP15.53■□□□□ 0.08
LIMS2-206ENST00000409754 TRIM17Q9Y577 477 aa15.53■□□□□ 0.08
LIMS2-206ENST00000409754 SFI1A8K8P3 1242 aa15.52■□□□□ 0.08
LIMS2-206ENST00000409754 CETN3O15182 167 aa15.52■□□□□ 0.08
LIMS2-206ENST00000409754 HIP1RO75146 1068 aa15.52■□□□□ 0.08
LIMS2-206ENST00000409754 PSAPP07602 524 aa15.52■□□□□ 0.08
LIMS2-206ENST00000409754 MAPK7Q13164 816 aa15.52■□□□□ 0.08
LIMS2-206ENST00000409754 ADAM9Q13443 819 aa15.52■□□□□ 0.08
LIMS2-206ENST00000409754 ZNF720Q7Z2F6 126 aa15.52■□□□□ 0.08
LIMS2-206ENST00000409754 CTU1Q7Z7A3 348 aaKnown RBP15.52■□□□□ 0.08
LIMS2-206ENST00000409754 ATP6V0A1Q93050 837 aa15.52■□□□□ 0.08
LIMS2-206ENST00000409754 SLC9A2Q9UBY0 812 aa15.52■□□□□ 0.08
LIMS2-206ENST00000409754 LRRC37A2A6NM11 1700 aa15.52■□□□□ 0.07
LIMS2-206ENST00000409754 KIAA1217Q5T5P2 1943 aa15.52■□□□□ 0.07
LIMS2-206ENST00000409754 SOWAHBA6NEL2 793 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 TNPO2O14787 897 aaKnown RBP15.51■□□□□ 0.07
LIMS2-206ENST00000409754 NKRFO15226 690 aaKnown RBP eCLIP15.51■□□□□ 0.07
LIMS2-206ENST00000409754 MAPTP10636 758 aaKnown RBP15.51■□□□□ 0.07
LIMS2-206ENST00000409754 FCGRTP55899 365 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 GRB14Q14449 540 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 SYCP1Q15431 976 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 NFIL3Q16649 462 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 CCDC40Q4G0X9 1142 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 FIGNQ5HY92 759 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 ODR4Q5SWX8 454 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 NYAP1Q6ZVC0 841 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 FAM178BQ8IXR5 827 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 DAW1Q8N136 415 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 FGD4Q96M96 766 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 C16orf45Q96MC5 204 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-206ENST00000409754 CCDC43Q96MW1 224 aaKnown RBP15.51■□□□□ 0.07
LIMS2-206ENST00000409754 BCAS3Q9H6U6 928 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 POLD4Q9HCU8 107 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 ABHD10Q9NUJ1 306 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 TRMT1Q9NXH9 659 aaKnown RBP15.51■□□□□ 0.07
LIMS2-206ENST00000409754 SRRDQ9UH36 339 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 CAPN11Q9UMQ6 739 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 PTCH2Q9Y6C5 1203 aa15.51■□□□□ 0.07
LIMS2-206ENST00000409754 MCM3APO60318 1980 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 IGHA2P01877 340 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 NR2F2P24468 414 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 RPL13P26373 211 aaKnown RBP15.5■□□□□ 0.07
LIMS2-206ENST00000409754 NMT1P30419 496 aaKnown RBP15.5■□□□□ 0.07
LIMS2-206ENST00000409754 MAPK4P31152 587 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 PPP1R13BQ96KQ4 1090 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 MPHOSPH6Q99547 160 aaKnown RBP15.5■□□□□ 0.07
LIMS2-206ENST00000409754 TTYH3Q9C0H2 523 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 MROH8Q9H579 483 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 LARSQ9P2J5 1176 aaKnown RBP15.5■□□□□ 0.07
LIMS2-206ENST00000409754 GABBR1Q9UBS5 961 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 PCDHB13Q9Y5F0 798 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 TTC26A0AVF1 554 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 RNF225M0QZC1 329 aaPredicted RBP15.5■□□□□ 0.07
LIMS2-206ENST00000409754 BACH1O14867 736 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 ZSCAN12O43309 604 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 TNNT1P13805 278 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 KRT9P35527 623 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 FLT3LGP49771 235 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 TERF1P54274 439 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 ACTR2P61160 394 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 ALCAMQ13740 583 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 PTPN14Q15678 1187 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 MIS18BP1Q6P0N0 1132 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 ABHD15Q6UXT9 468 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 OTUD6AQ7L8S5 288 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 FRMD5Q7Z6J6 570 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 PLEKHH3Q7Z736 793 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 TMTC1Q8IUR5 882 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 TRIM59Q8IWR1 403 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 STRA6Q9BX79 667 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 FAM184BQ9ULE4 1060 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 PTPN22Q9Y2R2 807 aa15.5■□□□□ 0.07
LIMS2-206ENST00000409754 LUC7L2Q9Y383 392 aaKnown RBP15.5■□□□□ 0.07
LIMS2-206ENST00000409754 R3HCC1Q9Y3T6 440 aaKnown RBP15.5■□□□□ 0.07
LIMS2-206ENST00000409754 MKI67P46013 3256 aaKnown RBP15.49■□□□□ 0.07
LIMS2-206ENST00000409754 ZMYM2Q9UBW7 1377 aa15.49■□□□□ 0.07
LIMS2-206ENST00000409754 A0A1W2PQJ5 194 aa15.49■□□□□ 0.07
LIMS2-206ENST00000409754 KIF2AO00139 706 aaPredicted RBP15.49■□□□□ 0.07
LIMS2-206ENST00000409754 SLC16A3O15427 465 aaKnown RBP15.49■□□□□ 0.07
LIMS2-206ENST00000409754 USO1O60763 962 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms