RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 DENND5AQ6IQ26 1287 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 RPAINQ86UA6 219 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 PPIL6Q8IXY8 311 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 CCDC146Q8IYE0 955 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 GSTCDQ8NEC7 633 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 NGDNQ8NEJ9 315 aaKnown RBP6.29□□□□□ -1.4
CLK1-202ENST00000409403 NPLOC4Q8TAT6 608 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 SLC7A14Q8TBB6 771 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 DCAF4Q8WV16 495 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 INTS4Q96HW7 963 aaKnown RBP6.29□□□□□ -1.4
CLK1-202ENST00000409403 HRASLS5Q96KN8 279 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 SLC52A2Q9HAB3 445 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 ATP13A1Q9HD20 1204 aa6.29□□□□□ -1.4
CLK1-202ENST00000409403 INTS7Q9NVH2 962 aaKnown RBP6.29□□□□□ -1.4
CLK1-202ENST00000409403 RBM28Q9NW13 759 aaKnown RBP6.29□□□□□ -1.4
CLK1-202ENST00000409403 MAGEC2Q9UBF1 373 aaPredicted RBP6.29□□□□□ -1.4
CLK1-202ENST00000409403 FKTNO75072 461 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 MMP10P09238 476 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 TPM1P09493 284 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 CCDC172P0C7W6 258 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 MYCLP1P12525 358 aaPredicted RBP6.28□□□□□ -1.4
CLK1-202ENST00000409403 TNNT1P13805 278 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 DHX8Q14562 1220 aaKnown RBP6.28□□□□□ -1.4
CLK1-202ENST00000409403 STYK1Q6J9G0 422 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 CREG2Q8IUH2 290 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 ITPRIPQ8IWB1 547 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 ASB11Q8WXH4 323 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 CDADC1Q9BWV3 514 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 TRIM39Q9HCM9 518 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 PCDH12Q9NPG4 1184 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.28□□□□□ -1.4
CLK1-202ENST00000409403 PCDHA11Q9Y5I1 949 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 ATP6V1DQ9Y5K8 247 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 ELP1O95163 1332 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 AKAP11Q9UKA4 1901 aa6.28□□□□□ -1.4
CLK1-202ENST00000409403 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.27□□□□□ -1.41
CLK1-202ENST00000409403 MEFVO15553 781 aaPredicted RBP6.27□□□□□ -1.41
CLK1-202ENST00000409403 CA12O43570 354 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 MX1P20591 662 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 IGBP1P78318 339 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 SATB1Q01826 763 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 TESK1Q15569 626 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 TTC31Q49AM3 519 aaPredicted RBP6.27□□□□□ -1.41
CLK1-202ENST00000409403 HSP90AB3PQ58FF7 597 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 E4F1Q66K89 784 aaPredicted RBP6.27□□□□□ -1.41
CLK1-202ENST00000409403 ATF7IPQ6VMQ6 1270 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 KRT26Q7Z3Y9 468 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 BRAPQ7Z569 592 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 LDHDQ86WU2 507 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 TACO1Q9BSH4 297 aaKnown RBP6.27□□□□□ -1.41
CLK1-202ENST00000409403 AP5S1Q9NUS5 200 aa6.27□□□□□ -1.41
CLK1-202ENST00000409403 SPTBN5Q9NRC6 3674 aaKnown RBP6.27□□□□□ -1.41
CLK1-202ENST00000409403 TRBV23OR9-2A0A075B6M9 112 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 A0A087X0B3 334 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 AQP7O14520 342 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 TGFB1P01137 390 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 ESR1P03372 595 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 PLS3P13797 630 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 SDSP20132 328 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 MCCP23508 829 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 HOXA10P31260 410 aaPredicted RBP6.26□□□□□ -1.41
CLK1-202ENST00000409403 USP8P40818 1118 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 ECE1P42892 770 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 UBE2HP62256 183 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 PRKCQQ04759 706 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 EGR3Q06889 387 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 TRDNQ13061 729 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 KCNAB2Q13303 367 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 AOC3Q16853 763 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 TPD52L1Q16890 204 aaPredicted RBP6.26□□□□□ -1.41
CLK1-202ENST00000409403 RSPO2Q6UXX9 243 aaPredicted RBP6.26□□□□□ -1.41
CLK1-202ENST00000409403 LRRTM3Q86VH5 581 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 THNSL2Q86YJ6 484 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 CNPY4Q8N129 248 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 IQUBQ8NA54 791 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 GOLGA5Q8TBA6 731 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 SYTL4Q96C24 671 aaPredicted RBP6.26□□□□□ -1.41
CLK1-202ENST00000409403 MISP3Q96FF7 219 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 FAM107BQ9H098 131 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 PSD3Q9NYI0 1048 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 CLEC1BQ9P126 229 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 VAV3Q9UKW4 847 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 PYCARDQ9ULZ3 195 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 TRAF6Q9Y4K3 522 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 NPFFR2Q9Y5X5 522 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 TMEM82A0PJX8 343 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 MYO1CO00159 1063 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 FGF10O15520 208 aaPredicted RBP6.26□□□□□ -1.41
CLK1-202ENST00000409403 PDE8AO60658 829 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 DNAJC8O75937 253 aaPredicted RBP6.26□□□□□ -1.41
CLK1-202ENST00000409403 SLU7O95391 586 aaKnown RBP6.26□□□□□ -1.41
CLK1-202ENST00000409403 CAVIN2O95810 425 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 CCDC192P0DO97 292 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 PAMP19021 973 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 LTBRP36941 435 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 STAT3P40763 770 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 ANAPC15P60006 121 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 TEKQ02763 1124 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 IQCEQ6IPM2 695 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 CERS3Q8IU89 383 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms