RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 KDM3AQ9Y4C1 1321 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 IGKV6D-21A0A0A0MT36 114 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 PROB1E7EW31 1015 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 hCG_1984214I3L0E3 225 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 STAG3L1P0CL83 205 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 ZNF76P36508 570 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 SREBF1P36956 1147 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 CLK2P49760 499 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 SLC26A2P50443 739 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 KRT76Q01546 638 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 PAK2Q13177 524 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 SMAD4Q13485 552 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 TSGA10IPQ3SY00 556 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 NAALADL2Q58DX5 795 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 BMP2KLQ5H9B9 411 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 ABHD15Q6UXT9 468 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 NIPA1Q7RTP0 329 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 NPAS4Q8IUM7 802 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 CMTR2Q8IYT2 770 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 ZNF713Q8N859 430 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 P2RX5Q93086 422 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 TCEANC2Q96MN5 208 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 TMEM260Q9NX78 707 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 PLAGL2Q9UPG8 496 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 CEP250Q9BV73 2442 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 FRYLO94915 3013 aa10.44□□□□□ -0.74
NIF3L1-203ENST00000409129 CFAP47Q6ZTR5 3102 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 KLF18A0A0U1RQI7 1052 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 GOLGA8AA7E2F4 631 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 GOLGA8BA8MQT2 603 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 HBP1O60381 514 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 CCNE2O96020 404 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 MMP1P03956 469 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 SCG2P13521 617 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 KLRC1P26715 233 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 CDC27P30260 824 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 CAMK1Q14012 370 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 ADCK5Q3MIX3 580 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 FAM160B1Q5W0V3 765 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 FAM43BQ6ZT52 329 aaPredicted RBP10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 FAM217BQ9NTX9 383 aaPredicted RBP10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 CD207Q9UJ71 328 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 MRPL42Q9Y6G3 142 aaKnown RBP10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 TTC3P53804 2025 aa10.43□□□□□ -0.74
NIF3L1-203ENST00000409129 ACACBO00763 2458 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 LOC730098B7Z3J9 87 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 FAM86B1E9PN63 330 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 DDX39AO00148 427 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 BACH1O14867 736 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 DHX15O43143 795 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 ITGB1P05556 798 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 HMGB1P09429 215 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 FAM86B2P0C5J1 330 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 DNAJB1P25685 340 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 ADD1P35611 737 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 RCAN1P53805 252 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 SIGLEC14Q08ET2 396 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 NFX1Q12986 1120 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 ADAM15Q13444 863 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 KRT32Q14532 448 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 PKN1Q16512 942 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 TMEM266Q2M3C6 531 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 PAN2Q504Q3 1202 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 ZNF484Q5JVG2 852 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 JAKMIP3Q5VZ66 844 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 SWSAP1Q6NVH7 229 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 FRMD5Q7Z6J6 570 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 PLA2G4DQ86XP0 818 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 KIAA0319LQ8IZA0 1049 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 SPPL3Q8TCT6 385 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 ATP8B4Q8TF62 1192 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 TMX1Q9H3N1 280 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 CDHR5Q9HBB8 845 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 ZNF302Q9NR11 478 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 LRFN2Q9ULH4 789 aa10.42□□□□□ -0.74
NIF3L1-203ENST00000409129 COL1A2P08123 1366 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 IGLV3-22A0A075B6J6 115 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 CCDC196A0A1B0GTZ2 297 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 IPO5O00410 1097 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 RPS6KA5O75582 802 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 CYP3A4P08684 503 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 SARSP49591 514 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 GATMP50440 423 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 FGD1P98174 961 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 PFKFB3Q16875 520 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 ODR4Q5SWX8 454 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 MCTP2Q6DN12 878 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 MIS18BP1Q6P0N0 1132 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 SKAP1Q86WV1 359 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 CCDC60Q8IWA6 550 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 ADSSL1Q8N142 457 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 KLHL23Q8NBE8 558 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 CRYGNQ8WXF5 182 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 PPP2R3CQ969Q6 453 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 MSLNLQ96KJ4 702 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 CNTNAP3BQ96NU0 1288 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 CNTNAP3Q9BZ76 1288 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 ERVK-5Q9HDB9 667 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms