RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 INTS9Q9NV88 658 aaKnown RBP9.03□□□□□ -0.96
SNX13-201ENST00000409076 MTMR4Q9NYA4 1195 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 POLLQ9UGP5 575 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 FRMD4BQ9Y2L6 1034 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 MRC1P22897 1456 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 MEFVO15553 781 aaPredicted RBP9.03□□□□□ -0.96
SNX13-201ENST00000409076 TOM1O60784 492 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 GAS7O60861 476 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 SERPINB2P05120 415 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 CHN1P15882 459 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 CYP11B2P19099 503 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 DR1Q01658 176 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 MEA1Q16626 185 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 LRRC45Q96CN5 670 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 AK8Q96MA6 479 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 DHX36Q9H2U1 1008 aaKnown RBP9.03□□□□□ -0.96
SNX13-201ENST00000409076 EFCC1Q9HA90 598 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 GPRC5CQ9NQ84 441 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 FBXO28Q9NVF7 368 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 SAMD15Q9P1V8 674 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 CRYBG1Q9Y4K1 1723 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 ARHGEF35A5YM69 484 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 LGR5O75473 907 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 GUCY2CP25092 1073 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 PSMC4P43686 418 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 GKAP1Q5VSY0 366 aaPredicted RBP9.03□□□□□ -0.96
SNX13-201ENST00000409076 NUGGCQ68CJ6 796 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 LRRC55Q6ZSA7 311 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 CCDC91Q7Z6B0 441 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 FBXO25Q8TCJ0 367 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 MICAL1Q8TDZ2 1067 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 RAPGEF5Q92565 580 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 KRT35Q92764 455 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 HAS1Q92839 578 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 PPP1R16BQ96T49 567 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 TTYH3Q9C0H2 523 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 ODF2LQ9ULJ1 636 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 TRIM33Q9UPN9 1127 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 ABCB11O95342 1321 aa9.03□□□□□ -0.96
SNX13-201ENST00000409076 PI4K2BG5E9Z4 385 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 ATF7P17544 494 aaPredicted RBP9.02□□□□□ -0.96
SNX13-201ENST00000409076 POLD1P28340 1107 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 ECE1P42892 770 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 BIRC3Q13489 604 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 SLC29A2Q14542 456 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 LRCH2Q5VUJ6 765 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 MMGT1Q8N4V1 131 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 NEDD1Q8NHV4 660 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 HVCN1Q96D96 273 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 C9orf72Q96LT7 481 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 KLF6Q99612 283 aaPredicted RBP9.02□□□□□ -0.96
SNX13-201ENST00000409076 ERVK-5Q9HDB9 667 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 SLC40A1Q9NP59 571 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 NAGPAQ9UK23 515 aa9.02□□□□□ -0.96
SNX13-201ENST00000409076 IGSF9BQ9UPX0 1349 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 TARSL2A2RTX5 802 aaKnown RBP9.02□□□□□ -0.97
SNX13-201ENST00000409076 NOL4O94818 638 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 CREB1P16220 341 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 LRRC63Q05C16 580 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 SEZ6Q53EL9 994 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 FAM102BQ5T8I3 360 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 FBXO11Q86XK2 927 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 DHX38Q92620 1227 aaKnown RBP9.02□□□□□ -0.97
SNX13-201ENST00000409076 KLC4Q9NSK0 619 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 MYO3BQ8WXR4 1341 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 PDE4DIPQ5VU43 2346 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 BCL9O00512 1426 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 GMNCA6NCL1 334 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 EML1O00423 815 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 CALUO43852 315 aaPredicted RBP9.02□□□□□ -0.97
SNX13-201ENST00000409076 TRIM37O94972 964 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 SEPT7Q16181 437 aaKnown RBP9.02□□□□□ -0.97
SNX13-201ENST00000409076 HGSNATQ68CP4 663 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 SRRM1Q8IYB3 904 aaKnown RBP9.02□□□□□ -0.97
SNX13-201ENST00000409076 RBM46Q8TBY0 533 aaKnown RBP9.02□□□□□ -0.97
SNX13-201ENST00000409076 ZNF653Q96CK0 615 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 RTFDC1Q9BY42 306 aaPredicted RBP9.02□□□□□ -0.97
SNX13-201ENST00000409076 EPN3Q9H201 632 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 SEMA4AQ9H3S1 761 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 C10orf88Q9H8K7 445 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 TOPORSQ9NS56 1045 aaPredicted RBP9.02□□□□□ -0.97
SNX13-201ENST00000409076 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.02□□□□□ -0.97
SNX13-201ENST00000409076 CHD4Q14839 1912 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 AKAP11Q9UKA4 1901 aa9.02□□□□□ -0.97
SNX13-201ENST00000409076 PNMA6FA0A0J9YX94 578 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 TCRBV7S2A1N4TA0A589 114 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 GOLGA8RI6L899 631 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 FTLP02792 175 aaPredicted RBP9.01□□□□□ -0.97
SNX13-201ENST00000409076 PON1P27169 355 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 MYL7Q01449 175 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 GRAPQ13588 217 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 NAB2Q15742 525 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 SEL1L2Q5TEA6 688 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 RPUSD2Q8IZ73 545 aaKnown RBP9.01□□□□□ -0.97
SNX13-201ENST00000409076 ARFGAP2Q8N6H7 521 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 PRPF38AQ8NAV1 312 aaKnown RBP9.01□□□□□ -0.97
SNX13-201ENST00000409076 GRAPLQ8TC17 118 aaPredicted RBP9.01□□□□□ -0.97
SNX13-201ENST00000409076 SEC16BQ96JE7 1060 aa9.01□□□□□ -0.97
SNX13-201ENST00000409076 PURBQ96QR8 312 aaKnown RBP9.01□□□□□ -0.97
SNX13-201ENST00000409076 DDX23Q9BUQ8 820 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms