RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 KLRC4O43908 158 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 MFAP3LO75121 409 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 FOSP01100 380 aaPredicted RBP14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 ZNF865P0CJ78 1059 aaPredicted RBP14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 CYP2C18P33260 490 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 TXKP42681 527 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 PDE4DQ08499 809 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 HSP90AA4PQ58FG1 418 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 PSRC1Q6PGN9 363 aaPredicted RBP14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 NSMFQ6X4W1 530 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 MCF2L2Q86YR7 1114 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 TMEM139Q8IV31 216 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 REXO1L1PQ8IX06 675 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 SLFN12Q8IYM2 578 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 KCTD17Q8N5Z5 321 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 MED15Q96RN5 788 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 MTRQ99707 1265 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 CCDC94Q9BW85 323 aaPredicted RBP14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 TRIM9Q9C026 710 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 MTIF3Q9H2K0 278 aaKnown RBP14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 PSTPIP2Q9H939 334 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 DNAI1Q9UI46 699 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 ZHX1Q9UKY1 873 aaPredicted RBP14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 FAM184BQ9ULE4 1060 aa14.28□□□□□ -0.12
SMARCB1-203ENST00000407082 ZNF236Q9UL36 1845 aa14.27□□□□□ -0.12
SMARCB1-203ENST00000407082 MROH7Q68CQ1 1323 aa14.27□□□□□ -0.12
SMARCB1-203ENST00000407082 MOXD2PA6NHM9 499 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 ADAMTS4O75173 837 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 FGBP02675 491 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 C6orf222P0C671 652 aaPredicted RBP14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 FECHP22830 423 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 CASP1P29466 404 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 CLK2P49760 499 aaKnown RBP14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 RABGGTBP53611 331 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 ADKP55263 362 aaKnown RBP14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 UBXN1Q04323 297 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 RBL2Q08999 1139 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 UNC13DQ70J99 1090 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 OTOP2Q7RTS6 562 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 MNS1Q8NEH6 495 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 P2RX5Q93086 422 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 TSG101Q99816 390 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 A1CFQ9NQ94 594 aaKnown RBP14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 ZNHIT6Q9NWK9 470 aaKnown RBP14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 MYO1AQ9UBC5 1043 aa14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 YBX2Q9Y2T7 364 aaKnown RBP14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 ZNFX1Q9P2E3 1918 aaKnown RBP14.27□□□□□ -0.13
SMARCB1-203ENST00000407082 MYADML2A6NDP7 307 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 LGALS16A8MUM7 142 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 OPLAHO14841 1288 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 ADAMTS3O15072 1205 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 TLR3O15455 904 aaKnown RBP14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 TEX33O43247 280 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 KIF5CO60282 957 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 CFBP00751 764 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 IRX5P78411 483 aaPredicted RBP14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 BAATQ14032 418 aaPredicted RBP14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 ZNF792Q3KQV3 632 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 TMEM31Q5JXX7 168 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 FKBP15Q5T1M5 1219 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 RASIP1Q5U651 963 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 PPP2R2DQ66LE6 453 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 RNF207Q6ZRF8 634 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 SMYD4Q8IYR2 804 aaPredicted RBP14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 CSGALNACT2Q8N6G5 542 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 TBC1D5Q92609 795 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 LARP4BQ92615 738 aaKnown RBP14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 VPS16Q9H269 839 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 IL23AQ9NPF7 189 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 ARGLU1Q9NWB6 273 aaPredicted RBP14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 CYP39A1Q9NYL5 469 aa14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 DDX25Q9UHL0 483 aaKnown RBP14.26□□□□□ -0.13
SMARCB1-203ENST00000407082 TBX3O15119 743 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 ASGR1P07306 291 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 MYOGP15173 224 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 CDC25AP30304 524 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 GNG11P61952 73 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 RPS6P62753 249 aaKnown RBP14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 LRRC63Q05C16 580 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 NCBP1Q09161 790 aaKnown RBP14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 GNASQ5JWF2 1037 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 PCSK9Q8NBP7 692 aaKnown RBP14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 KLHDC9Q8NEP7 349 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 OR8K1Q8NGG5 319 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 ERMNQ8TAM6 284 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 HERVK_113Q902F9 699 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 MAF1Q9H063 256 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 PCDHA12Q9UN75 941 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 DIS3Q9Y2L1 958 aaKnown RBP14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 GDAQ9Y2T3 454 aa14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 LUC7L2Q9Y383 392 aaKnown RBP14.25□□□□□ -0.13
SMARCB1-203ENST00000407082 DNAJC25-GNG10A0A024R161 153 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 CYP3A7-CYP3A51PA0A087WV96 503 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 PP2D1A8MPX8 630 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 ZBBXA8MT70 800 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms