RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PIK3CDO00329 1044 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 TGFB1I1O43294 461 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 RSPH10BP0C881 870 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 MUTP22033 750 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 INPP5BP32019 993 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 ZNF76P36508 570 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 HSD17B3P37058 310 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 TRAF1Q13077 416 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 BIRC3Q13489 604 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 PPP2R5EQ16537 467 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 DAAM2Q86T65 1068 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 SIAH1Q8IUQ4 282 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 SLC30A5Q8TAD4 765 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 SEC14L1Q92503 715 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 RUSC1Q9BVN2 902 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 STK33Q9BYT3 514 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 SEL1LQ9UBV2 794 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 GGA2Q9UJY4 613 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 AMFRQ9UKV5 643 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 H0YGN5 161 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 CLIC2O15247 247 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 FAM13AO94988 1023 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 ALDH1B1P30837 517 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 SOX5P35711 763 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 HDLBPQ00341 1268 aaKnown RBP11.69□□□□□ -0.54
CLIP4-204ENST00000404424 CYP4A11Q02928 519 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 PTGISQ16647 500 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 BTNL9Q6UXG8 535 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 PODNQ7Z5L7 613 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 YTHDF3Q7Z739 585 aaKnown RBP11.69□□□□□ -0.54
CLIP4-204ENST00000404424 FAM186BQ8IYM0 893 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 U2AF1L4Q8WU68 220 aaKnown RBP11.69□□□□□ -0.54
CLIP4-204ENST00000404424 TMX4Q9H1E5 349 aaPredicted RBP11.69□□□□□ -0.54
CLIP4-204ENST00000404424 FAM114A2Q9NRY5 505 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 NFS1Q9Y697 457 aa11.69□□□□□ -0.54
CLIP4-204ENST00000404424 NCANO14594 1321 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 DDTLA6NHG4 134 aaPredicted RBP11.68□□□□□ -0.54
CLIP4-204ENST00000404424 EVI5O60447 810 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 KIAA0754O94854 1291 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 TMEM253P0C7T8 217 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 NPR1P16066 1061 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 CTNNA1P35221 906 aaKnown RBP11.68□□□□□ -0.54
CLIP4-204ENST00000404424 FKBP1AP62942 108 aaKnown RBP11.68□□□□□ -0.54
CLIP4-204ENST00000404424 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
CLIP4-204ENST00000404424 CLUL1Q15846 466 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 USH1GQ495M9 461 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 STXBP4Q6ZWJ1 553 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 HSD17B14Q9BPX1 270 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 AP1M1Q9BXS5 423 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 GOLPH3Q9H4A6 298 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 AJAP1Q9UKB5 411 aaPredicted RBP11.68□□□□□ -0.54
CLIP4-204ENST00000404424 SYNPO2Q9UMS6 1093 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 SAMM50Q9Y512 469 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 F8VZ95 297 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 NDUFB10O96000 172 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 BMP3P12645 472 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 GALCP54803 685 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 GUCY1A3Q02108 690 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 SPDYCQ5MJ68 293 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 AGBL2Q5U5Z8 902 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 C1orf186Q6ZWK4 172 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 MYCT1Q8N699 235 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 C3orf20Q8ND61 904 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 RFFLQ8WZ73 363 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 NAP1L3Q99457 506 aaPredicted RBP11.68□□□□□ -0.54
CLIP4-204ENST00000404424 DDX47Q9H0S4 455 aaKnown RBP11.68□□□□□ -0.54
CLIP4-204ENST00000404424 RABEP2Q9H5N1 569 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 KCND2Q9NZV8 630 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 UTP11Q9Y3A2 253 aaKnown RBP11.68□□□□□ -0.54
CLIP4-204ENST00000404424 SIPA1L1O43166 1804 aa11.68□□□□□ -0.54
CLIP4-204ENST00000404424 EML1O00423 815 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 MEFVO15553 781 aaPredicted RBP11.67□□□□□ -0.54
CLIP4-204ENST00000404424 SLURP2P0DP57 97 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 HMGB2P26583 209 aaKnown RBP11.67□□□□□ -0.54
CLIP4-204ENST00000404424 FMO5P49326 533 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 KCNA1Q09470 495 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 PPP2R5AQ15172 486 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 UAP1Q16222 522 aaPredicted RBP11.67□□□□□ -0.54
CLIP4-204ENST00000404424 ABCB5Q2M3G0 1257 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 NAA35Q5VZE5 725 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 OTOP1Q7RTM1 612 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 LNX1Q8TBB1 728 aaPredicted RBP11.67□□□□□ -0.54
CLIP4-204ENST00000404424 RGL1Q9NZL6 768 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 FRMD4BQ9Y2L6 1034 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 ZMYM2Q9UBW7 1377 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 IGLV3-22A0A075B6J6 115 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 SLITRK3O94933 977 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 FAM107AO95990 144 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 RFX1P22670 979 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 LIG3P49916 1009 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 PPATQ06203 517 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 TCP10Q12799 353 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 PPP2R5CQ13362 524 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 GJB7Q6PEY0 223 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 HS2ST1Q7LGA3 356 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 NLRP14Q86W24 1093 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms