RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 THAP2Q9H0W7 228 aa22.81■■□□□ 1.24
CTCF-202ENST00000401394 ASTN1O14525 1302 aa22.81■■□□□ 1.24
CTCF-202ENST00000401394 DRD4P21917 467 aa22.81■■□□□ 1.24
CTCF-202ENST00000401394 LRRC14Q15048 493 aa22.81■■□□□ 1.24
CTCF-202ENST00000401394 FAM133BQ5BKY9 247 aaKnown RBP22.81■■□□□ 1.24
CTCF-202ENST00000401394 ZNF804AQ7Z570 1209 aa22.81■■□□□ 1.24
CTCF-202ENST00000401394 PBKQ96KB5 322 aa22.81■■□□□ 1.24
CTCF-202ENST00000401394 TCRBV7S2A1N4TA0A589 114 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 NR3C1P04150 777 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 FGFR4P22455 802 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 ACCSLQ4AC99 568 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 CACNA2D3Q8IZS8 1091 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 KRT35Q92764 455 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 POP1Q99575 1024 aaKnown RBP22.8■■□□□ 1.24
CTCF-202ENST00000401394 SEMA4AQ9H3S1 761 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 AZI2Q9H6S1 392 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 ZNF287Q9HBT7 754 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 DAGLAQ9Y4D2 1042 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 PCDHA1Q9Y5I3 950 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 FAM86B1E9PN63 330 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 ATMINO43313 823 aaPredicted RBP22.8■■□□□ 1.24
CTCF-202ENST00000401394 CHMP2AO43633 222 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 LDHCP07864 332 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 FAM86B2P0C5J1 330 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 CREB1P16220 341 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 CDC25CP30307 473 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 POU5F1Q01860 360 aaKnown RBP22.8■■□□□ 1.24
CTCF-202ENST00000401394 QRICH1Q2TAL8 776 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 PAXIP1Q6ZW49 1069 aaPredicted RBP22.8■■□□□ 1.24
CTCF-202ENST00000401394 YTHDF3Q7Z739 585 aaKnown RBP22.8■■□□□ 1.24
CTCF-202ENST00000401394 TATDN2Q93075 761 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 HVCN1Q96D96 273 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 DBR1Q9UK59 544 aaKnown RBP22.8■■□□□ 1.24
CTCF-202ENST00000401394 MARSP56192 900 aaKnown RBP22.8■■□□□ 1.24
CTCF-202ENST00000401394 CBWD6Q4V339 395 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 CBWD3Q5JTY5 395 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 CBWD5Q5RIA9 395 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 OTUD6AQ7L8S5 288 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 PARP9Q8IXQ6 854 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 MGARPQ8TDB4 240 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 EPS8L3Q8TE67 593 aaKnown RBP22.8■■□□□ 1.24
CTCF-202ENST00000401394 PSMD1Q99460 953 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 DNAJC17Q9NVM6 304 aaKnown RBP22.8■■□□□ 1.24
CTCF-202ENST00000401394 POLLQ9UGP5 575 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 CD2APQ9Y5K6 639 aa22.8■■□□□ 1.24
CTCF-202ENST00000401394 ANKRD63C9JTQ0 380 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 KRT13P13646 458 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 UBXN2AP68543 259 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 SETQ01105 290 aaPredicted RBP22.79■■□□□ 1.24
CTCF-202ENST00000401394 CTTNQ14247 550 aaKnown RBP22.79■■□□□ 1.24
CTCF-202ENST00000401394 SLC29A2Q14542 456 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 LRIG3Q6UXM1 1119 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 FMO2Q99518 471 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 PAGR1Q9BTK6 254 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 PTPN22Q9Y2R2 807 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 EML1O00423 815 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 FLOT1O75955 427 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 ADCY1Q08828 1119 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 NFIAQ12857 509 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 BTBD6Q96KE9 485 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 NYXQ9GZU5 481 aa22.79■■□□□ 1.24
CTCF-202ENST00000401394 UTP11Q9Y3A2 253 aaKnown RBP22.79■■□□□ 1.24
CTCF-202ENST00000401394 LAMB2P55268 1798 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 TISP43B9A030 160 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 USP8P40818 1118 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 KCNJ1P48048 391 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 TCP10Q12799 353 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 SLC20A1Q8WUM9 679 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 HES6Q96HZ4 224 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 PRMT1Q99873 361 aaKnown RBP22.78■■□□□ 1.24
CTCF-202ENST00000401394 ANO3Q9BYT9 981 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 ADAM7Q9H2U9 754 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 CHUKO15111 745 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 DDX3YO15523 660 aaKnown RBP22.78■■□□□ 1.24
CTCF-202ENST00000401394 GNA14O95837 355 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 CYP2J2P51589 502 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 CDR1P51861 262 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 MAEAQ7L5Y9 396 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 LRRC34Q8IZ02 419 aa22.78■■□□□ 1.24
CTCF-202ENST00000401394 N4BP2L2Q92802 583 aaPredicted RBP22.78■■□□□ 1.24
CTCF-202ENST00000401394 ELAC2Q9BQ52 826 aaKnown RBP22.78■■□□□ 1.24
CTCF-202ENST00000401394 ZBTB5O15062 677 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 MRPL12P52815 198 aaKnown RBP22.77■■□□□ 1.24
CTCF-202ENST00000401394 SPIRE1Q08AE8 756 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 GRAPQ13588 217 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 DRAP1Q14919 205 aaPredicted RBP22.77■■□□□ 1.24
CTCF-202ENST00000401394 HIBCHQ6NVY1 386 aaPredicted RBP22.77■■□□□ 1.24
CTCF-202ENST00000401394 ARFGAP2Q8N6H7 521 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 GRAPLQ8TC17 118 aaPredicted RBP22.77■■□□□ 1.24
CTCF-202ENST00000401394 TCP11Q8WWU5 503 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 XPO6Q96QU8 1125 aaKnown RBP22.77■■□□□ 1.24
CTCF-202ENST00000401394 A6NNZ2 444 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 C6orf229H3BNL8 230 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 TGFB1I1O43294 461 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 MMEP08473 750 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 PLCG2P16885 1265 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 RDXP35241 583 aaKnown RBP22.77■■□□□ 1.24
CTCF-202ENST00000401394 JAM2P57087 298 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 TUBB8Q3ZCM7 444 aa22.77■■□□□ 1.24
CTCF-202ENST00000401394 RUFY4Q6ZNE9 571 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms