RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 SLF2Q8IX21 1173 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 BANK1Q8NDB2 785 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 JPH2Q9BR39 696 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 CCDC113Q9H0I3 377 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 PCIF1Q9H4Z3 704 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 TMEM59LQ9UK28 342 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 MSH4O15457 936 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 CFBP00751 764 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 MARCKSL1P49006 195 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 DRAP1Q14919 205 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 ZYXQ15942 572 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 GPATCH4Q5T3I0 446 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 RC3H1Q5TC82 1133 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 NT5DC3Q86UY8 548 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 ZC3H12CQ9C0D7 883 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 PNMA2Q9UL42 364 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 HMGB1P1B2RPK0 211 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 H0YGN5 161 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 hCG_1984214I3L0E3 225 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 GCFC2P16383 781 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 DCAF12L1Q5VU92 463 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 ZNF713Q8N859 430 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 ETNPPLQ8TBG4 499 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 SELENOSQ9BQE4 189 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 THAP2Q9H0W7 228 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 DNAJC12Q9UKB3 198 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 NFS1Q9Y697 457 aa11.5□□□□□ -0.57
PPP4R1-203ENST00000400556 HGSO14964 777 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 TGFB1I1O43294 461 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 CPP00450 1065 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 HLA-DOAP06340 250 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 NOVP48745 357 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 EDRF1Q3B7T1 1238 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 FAM186BQ8IYM0 893 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 RBM17Q96I25 401 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 GGT7Q9UJ14 662 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 RABGAP1Q9Y3P9 1069 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 FAM13AO94988 1023 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 GUCY2CP25092 1073 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 STAT1P42224 750 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 SLC20A1Q8WUM9 679 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 RUBCNQ92622 972 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 LENG9Q96B70 501 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 EIF2AK1Q9BQI3 630 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 PLCB1Q9NQ66 1216 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 DDX20Q9UHI6 824 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 GOLGA6L7A0A1B0GV03 622 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 CALUO43852 315 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 CAND2O75155 1236 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 GYS1P13807 737 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 MARSP56192 900 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 JAG1P78504 1218 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 CERKLQ49MI3 558 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 CCDC38Q502W7 563 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 HYIQ5T013 277 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 CCDC13Q8IYE1 715 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 MREGQ8N565 214 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 SYT2Q8N9I0 419 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 TBC1D22AQ8WUA7 517 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 RAPGEF5Q92565 580 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 HOOK2Q96ED9 719 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 DYDC2Q96IM9 177 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 CABS1Q96KC9 395 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 AMFRQ9UKV5 643 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 PTPN22Q9Y2R2 807 aa11.49□□□□□ -0.57
PPP4R1-203ENST00000400556 FOXO6A8MYZ6 492 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 UBAP1LF5GYI3 381 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 F5H6K3 240 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 FAM107AO95990 144 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 IFNAR2P48551 515 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 FNTAP49354 379 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 KLRC3Q07444 240 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 CCDC174Q6PII3 467 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 TMC3Q7Z5M5 1100 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 VPS36Q86VN1 386 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 ALG3Q92685 438 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 PBKQ96KB5 322 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 BTBD6Q96KE9 485 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 FAM84AQ96KN4 292 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 RPA1P27694 616 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 ICA1Q05084 483 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 DDR1Q08345 913 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 MCTP2Q6DN12 878 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 CCDC25Q86WR0 208 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 ZSWIM2Q8NEG5 633 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 ACTRT1Q8TDG2 376 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 KRT35Q92764 455 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 LRRC45Q96CN5 670 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 C18orf8Q96DM3 657 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 CCDC114Q96M63 670 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 DNAJC17Q9NVM6 304 aaKnown RBP11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 ZBTB21Q9ULJ3 1066 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 TRAF3IP3Q9Y228 551 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 UTP11Q9Y3A2 253 aaKnown RBP11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 ARFGEF1Q9Y6D6 1849 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 GMNCA6NCL1 334 aa11.48□□□□□ -0.57
PPP4R1-203ENST00000400556 APOBEC3HQ6NTF7 200 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms