RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 CYP26B1Q9NR63 512 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 INTS13Q9NVM9 706 aa12.94□□□□□ -0.34
SKA3-203ENST00000400018 ZBTB42B2RXF5 422 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 LGALS2P05162 132 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 EDN1P05305 212 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 C6orf222P0C671 652 aaPredicted RBP12.93□□□□□ -0.34
SKA3-203ENST00000400018 RGS2P41220 211 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 FCGRTP55899 365 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 FILIP1Q7Z7B0 1213 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 TLK2Q86UE8 772 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 GTF3C2Q8WUA4 911 aaPredicted RBP12.93□□□□□ -0.34
SKA3-203ENST00000400018 CDHR1Q96JP9 859 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 SENP7Q9BQF6 1050 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 ABHD16BQ9H3Z7 469 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 KIAA0100Q14667 2235 aaKnown RBP12.93□□□□□ -0.34
SKA3-203ENST00000400018 MYH11P35749 1972 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 MAFGO15525 162 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 OATP04181 439 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 SRGAP2CP0DJJ0 459 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 CASP4P49662 377 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 KLK7P49862 253 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 EHHADHQ08426 723 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 PLCB4Q15147 1175 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 C4orf19Q8IY42 314 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 ASAP3Q8TDY4 903 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 MMRN2Q9H8L6 949 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 RNF19AQ9NV58 838 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 SETD4Q9NVD3 440 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 MAFBQ9Y5Q3 323 aaPredicted RBP12.93□□□□□ -0.34
SKA3-203ENST00000400018 NFASCO94856 1347 aa12.93□□□□□ -0.34
SKA3-203ENST00000400018 K7ENM7 598 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 SERPINC1P01008 464 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
SKA3-203ENST00000400018 FGFR4P22455 802 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 SFNP31947 248 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 POLGP54098 1239 aaPredicted RBP12.92□□□□□ -0.34
SKA3-203ENST00000400018 FANCCQ00597 558 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
SKA3-203ENST00000400018 CCDC65Q8IXS2 484 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 DRC7Q8IY82 874 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 MORC4Q8TE76 937 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 HHIPL1Q96JK4 782 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 APBA2Q99767 749 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 CUEDC2Q9H467 287 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 AZI2Q9H6S1 392 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 TRIP12Q14669 1992 aaPredicted RBP12.92□□□□□ -0.34
SKA3-203ENST00000400018 GOLGA8IPA6NC78 632 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 GOLGA8JA6NMD2 632 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 ATG7O95352 703 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 VTNP04004 478 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 MYL3P08590 195 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 IBSPP21815 317 aaPredicted RBP12.92□□□□□ -0.34
SKA3-203ENST00000400018 COPB2P35606 906 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 CEP135Q66GS9 1140 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 CXCL17Q6UXB2 119 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 FAM178BQ8IXR5 827 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 ABRAQ8N0Z2 381 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 CCDC34Q96HJ3 373 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 C16orf70Q9BSU1 422 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 NAT10Q9H0A0 1025 aaKnown RBP12.92□□□□□ -0.34
SKA3-203ENST00000400018 POLR3FQ9H1D9 316 aaPredicted RBP12.92□□□□□ -0.34
SKA3-203ENST00000400018 TMEM51Q9NW97 253 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 TRIM17Q9Y577 477 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 IGSF9BQ9UPX0 1349 aa12.92□□□□□ -0.34
SKA3-203ENST00000400018 STAM2O75886 525 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 INSRRP14616 1297 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 TTI2Q6NXR4 508 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 C17orf53Q8N3J3 647 aaPredicted RBP12.91□□□□□ -0.34
SKA3-203ENST00000400018 CSGALNACT2Q8N6G5 542 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 ATP6V0A1Q93050 837 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 FAM49AQ9H0Q0 323 aaPredicted RBP12.91□□□□□ -0.34
SKA3-203ENST00000400018 PARVGQ9HBI0 331 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
SKA3-203ENST00000400018 LRRN2O75325 713 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 GH1P01241 217 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 MMP3P08254 477 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 TGFB3P10600 412 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 HARSP12081 509 aaKnown RBP12.91□□□□□ -0.34
SKA3-203ENST00000400018 ZSCAN20P17040 1043 aaPredicted RBP12.91□□□□□ -0.34
SKA3-203ENST00000400018 EMC2Q15006 297 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 DUSP28Q4G0W2 176 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 CPLX3Q8WVH0 158 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 P2RX5Q93086 422 aa12.91□□□□□ -0.34
SKA3-203ENST00000400018 MGAMO43451 1857 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 LRRIQ4A6NIV6 560 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 H3BRB1 525 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 CYP2J2P51589 502 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 KCNB1Q14721 858 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 CNNM4Q6P4Q7 775 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 MYOCDQ8IZQ8 938 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 ZBTB45Q96K62 511 aaPredicted RBP12.9□□□□□ -0.34
SKA3-203ENST00000400018 NLRP4Q96MN2 994 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 PYM1Q9BRP8 204 aaKnown RBP12.9□□□□□ -0.34
SKA3-203ENST00000400018 TUT1Q9H6E5 874 aaKnown RBP12.9□□□□□ -0.34
SKA3-203ENST00000400018 VTA1Q9NP79 307 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
SKA3-203ENST00000400018 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 IGKV6D-21A0A0A0MT36 114 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 ADCY3O60266 1144 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms