RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 PDIA3P30101 505 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 SIX5Q8N196 739 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 EGFL8Q99944 293 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 DRC3Q9H069 523 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 RPAP3Q9H6T3 665 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 CHEK2O96017 543 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 ADORA2BP29275 332 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 PHKA1P46020 1223 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 SCARF1Q14162 830 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 EFHBQ8N7U6 833 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 PIGSQ96S52 555 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 PPP1R9AQ9ULJ8 1098 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 PCDHB9Q9Y5E1 797 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 A0A1B0GUA9 196 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 MAPK6Q16659 721 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 MGAT5BQ3V5L5 792 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 KLC3Q6P597 504 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 SH3BP5LQ7L8J4 393 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 ARHGAP24Q8N264 748 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 PPWD1Q96BP3 646 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 GDAP1L1Q96MZ0 367 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 ACAP3Q96P50 834 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 MAPK9P45984 424 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 POLR2FP61218 127 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 EIF2B5Q13144 721 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 CEP68Q76N32 757 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 GAS2L1Q99501 681 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 ZWILCHQ9H900 591 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 ABCB11O95342 1321 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 GPC3P51654 580 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 PAK2Q13177 524 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 EPAS1Q99814 870 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 CAPN11Q9UMQ6 739 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 ZFYVE16Q7Z3T8 1539 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 RAG1P15918 1043 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 ALDH7A1P49419 539 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 TERF2Q15554 542 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 ELF2Q15723 593 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 IFT20Q8IY31 132 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 CASS4Q9NQ75 786 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 INHBAP08476 426 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 TROVE2P10155 538 aaKnown RBP eCLIP11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 HMGCS2P54868 508 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 ANGEL2Q5VTE6 544 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 PRAMEF18Q5VWM3 479 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 RGL4Q8IZJ4 473 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 DEPDC1BQ8WUY9 529 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 ULK4Q96C45 1275 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 TEX12Q9BXU0 123 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 MUC3BQ9H195 1237 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 ATP6V0A4Q9HBG4 840 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 IQGAP3Q86VI3 1631 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 ORC4O43929 436 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 MESDQ14696 234 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 DHX38Q92620 1227 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 NFKBIZQ9BYH8 718 aa11.73□□□□□ -0.53
CACNA1C-216ENST00000399638 UNC13BO14795 1591 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 MAPK4P31152 587 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 KPNA2P52292 529 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 DEUP1Q05D60 604 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 ZNF512Q96ME7 567 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 TRIM8Q9BZR9 551 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 TMEM39AQ9NV64 488 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 SCOCQ9UIL1 159 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 CDV3Q9UKY7 258 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 ATP10DQ9P241 1426 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 FAM196BA6NMK8 535 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 PSMC2P35998 433 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 TMEM62Q0P6H9 643 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 SLMAPQ14BN4 828 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 ZNF667Q5HYK9 610 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 TMEM179Q6ZVK1 233 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 TMTC1Q8IUR5 882 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 STKLD1Q8NE28 680 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 MORC2Q9Y6X9 1032 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 E7EWF7 191 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 ZSCAN9O15535 394 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 ZNF202O95125 648 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 TXNP10599 105 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 PEX3P56589 373 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 LMNB2Q03252 620 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 SNX1Q13596 522 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 CCDC84Q86UT8 332 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 NBPF15Q8N660 670 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 SAMD9LQ8IVG5 1584 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 ARIH2O95376 493 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms