RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 MGAT3Q09327 533 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 TMEM119Q4V9L6 283 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 PLA2G4FQ68DD2 849 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 CABP7Q86V35 215 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 USP38Q8NB14 1042 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 TCP11Q8WWU5 503 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 CALML4Q96GE6 196 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 CCDC43Q96MW1 224 aaKnown RBP19.7■□□□□ 0.74
CTNS-203ENST00000399306 CSRNP2Q9H175 543 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 PRO3102Q9H379 93 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 IL23AQ9NPF7 189 aa19.7■□□□□ 0.74
CTNS-203ENST00000399306 DDX19AQ9NUU7 478 aaKnown RBP19.7■□□□□ 0.74
CTNS-203ENST00000399306 A0A1W2PPC1 479 aa19.69■□□□□ 0.74
CTNS-203ENST00000399306 PP2D1A8MPX8 630 aa19.69■□□□□ 0.74
CTNS-203ENST00000399306 ASAP2O43150 1006 aa19.69■□□□□ 0.74
CTNS-203ENST00000399306 TXLNAP40222 546 aa19.69■□□□□ 0.74
CTNS-203ENST00000399306 POLGP54098 1239 aaPredicted RBP19.69■□□□□ 0.74
CTNS-203ENST00000399306 CCL23P55773 120 aa19.69■□□□□ 0.74
CTNS-203ENST00000399306 MRPS6P82932 125 aaKnown RBP19.69■□□□□ 0.74
CTNS-203ENST00000399306 GRIN1Q05586 938 aa19.69■□□□□ 0.74
CTNS-203ENST00000399306 ECM1Q16610 540 aa19.69■□□□□ 0.74
CTNS-203ENST00000399306 PSRC1Q6PGN9 363 aaPredicted RBP19.69■□□□□ 0.74
CTNS-203ENST00000399306 TRMT1LQ7Z2T5 733 aaKnown RBP19.69■□□□□ 0.74
CTNS-203ENST00000399306 CDK5RAP3Q96JB5 506 aa19.69■□□□□ 0.74
CTNS-203ENST00000399306 CHMP5Q9NZZ3 219 aa19.69■□□□□ 0.74
CTNS-203ENST00000399306 TMEM150BA6NC51 233 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 CSF2RAP15509 400 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 CDC25AP30304 524 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 GRB10Q13322 594 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 METTL13Q8N6R0 699 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 MCPH1Q8NEM0 835 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 PIGOQ8TEQ8 1089 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 PNMA5Q96PV4 448 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 MTRQ99707 1265 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 CELF4Q9BZC1 486 aaKnown RBP19.68■□□□□ 0.74
CTNS-203ENST00000399306 FAM49AQ9H0Q0 323 aaPredicted RBP19.68■□□□□ 0.74
CTNS-203ENST00000399306 ATP6V0A4Q9HBG4 840 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 KCND2Q9NZV8 630 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 TRPV2Q9Y5S1 764 aa19.68■□□□□ 0.74
CTNS-203ENST00000399306 ARHGEF35A5YM69 484 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 ZBTB39O15060 712 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 CHRNA1P02708 482 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 MDM2Q00987 491 aaPredicted RBP19.67■□□□□ 0.74
CTNS-203ENST00000399306 POU5F1BQ06416 359 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 EMC2Q15006 297 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 ODR4Q5SWX8 454 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 ZNF410Q86VK4 478 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 SCLYQ96I15 445 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 IPO9Q96P70 1041 aaKnown RBP19.67■□□□□ 0.74
CTNS-203ENST00000399306 TIPINQ9BVW5 301 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 SUGCTQ9HAC7 445 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 CCDC39Q9UFE4 941 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 CDY2AQ9Y6F7 541 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 SCN5AQ14524 2016 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 TET1Q8NFU7 2136 aa19.67■□□□□ 0.74
CTNS-203ENST00000399306 CYP11B2P19099 503 aa19.66■□□□□ 0.74
CTNS-203ENST00000399306 CLCN3P51790 818 aa19.66■□□□□ 0.74
CTNS-203ENST00000399306 CRYBB1P53674 252 aaPredicted RBP19.66■□□□□ 0.74
CTNS-203ENST00000399306 MKRN4PQ13434 485 aaPredicted RBP19.66■□□□□ 0.74
CTNS-203ENST00000399306 MXD4Q14582 209 aaPredicted RBP19.66■□□□□ 0.74
CTNS-203ENST00000399306 GPNMBQ14956 572 aa19.66■□□□□ 0.74
CTNS-203ENST00000399306 AXDND1Q5T1B0 1012 aaPredicted RBP19.66■□□□□ 0.74
CTNS-203ENST00000399306 LEO1Q8WVC0 666 aaPredicted RBP19.66■□□□□ 0.74
CTNS-203ENST00000399306 PSPC1Q8WXF1 523 aaKnown RBP19.66■□□□□ 0.74
CTNS-203ENST00000399306 SYMPKQ92797 1274 aaKnown RBP19.66■□□□□ 0.74
CTNS-203ENST00000399306 ZBTB10Q96DT7 871 aa19.66■□□□□ 0.74
CTNS-203ENST00000399306 SPATA32Q96LK8 384 aa19.66■□□□□ 0.74
CTNS-203ENST00000399306 CLIC6Q96NY7 704 aa19.66■□□□□ 0.74
CTNS-203ENST00000399306 BHMT2Q9H2M3 363 aa19.66■□□□□ 0.74
CTNS-203ENST00000399306 STK17AQ9UEE5 414 aa19.66■□□□□ 0.74
CTNS-203ENST00000399306 AKT3Q9Y243 479 aa19.66■□□□□ 0.74
CTNS-203ENST00000399306 SIP14410 1827 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 NBNO60934 754 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 EFCAB14O75071 495 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 GPR32O75388 356 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 MBTPS1Q14703 1052 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 FOXD4L6Q3SYB3 417 aaPredicted RBP19.65■□□□□ 0.74
CTNS-203ENST00000399306 FBXO47Q5MNV8 452 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 PADI6Q6TGC4 694 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 FOXD4L3Q6VB84 417 aaPredicted RBP19.65■□□□□ 0.74
CTNS-203ENST00000399306 CCDC73Q6ZRK6 1079 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 LRRC71Q8N4P6 559 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 SYT2Q8N9I0 419 aaPredicted RBP19.65■□□□□ 0.74
CTNS-203ENST00000399306 APBB2Q92870 758 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 VWCEQ96DN2 955 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 SH2D3AQ9BRG2 576 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 PYM1Q9BRP8 204 aaKnown RBP19.65■□□□□ 0.74
CTNS-203ENST00000399306 UBE2OQ9C0C9 1292 aaKnown RBP19.65■□□□□ 0.74
CTNS-203ENST00000399306 XPNPEP1Q9NQW7 623 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 SUCLA2Q9P2R7 463 aaPredicted RBP19.65■□□□□ 0.74
CTNS-203ENST00000399306 PCDHA7Q9UN72 937 aa19.65■□□□□ 0.74
CTNS-203ENST00000399306 BAIAP3O94812 1187 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 CTSHP09668 335 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 ACTN1P12814 892 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 ME1P48163 572 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 GPC3P51654 580 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 PLEKHG4Q58EX7 1191 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 TMEM240Q5SV17 173 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 ADALQ6DHV7 355 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 CNKSR3Q6P9H4 555 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms