RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 SULF1Q8IWU6 871 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 NOA1Q8NC60 698 aaKnown RBP12.9□□□□□ -0.34
COL25A1-202ENST00000399127 FIZ1Q96SL8 496 aa12.9□□□□□ -0.34
COL25A1-202ENST00000399127 MAGEA1P43355 309 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 CYP2J2P51589 502 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 GYS2P54840 703 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 PCNX4Q63HM2 1172 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 ZNF720Q7Z2F6 126 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 TRAPPC11Q7Z392 1133 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 EGFL6Q8IUX8 553 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 DAW1Q8N136 415 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 CTAGE15A4D2H0 777 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
COL25A1-202ENST00000399127 ZNF185O15231 689 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 CTAGE8P0CG41 777 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
COL25A1-202ENST00000399127 PTPRAP18433 802 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 RPL13P26373 211 aaKnown RBP12.89□□□□□ -0.35
COL25A1-202ENST00000399127 BAATQ14032 418 aaPredicted RBP12.89□□□□□ -0.35
COL25A1-202ENST00000399127 SLC9C1Q4G0N8 1177 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 CTAGE6Q86UF2 777 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 CTAGE4Q8IX94 777 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 ZNF280CQ8ND82 737 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 EHBP1Q8NDI1 1231 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 SLC35C1Q96A29 364 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL25A1-202ENST00000399127 GANQ9H2C0 597 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 JADE2Q9NQC1 790 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 RNF146Q9NTX7 359 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 FAM53CQ9NYF3 392 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 SALL4Q9UJQ4 1053 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 UBIAD1Q9Y5Z9 338 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 SAR1BQ9Y6B6 198 aa12.89□□□□□ -0.35
COL25A1-202ENST00000399127 MYH11P35749 1972 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
COL25A1-202ENST00000399127 BCRP11274 1271 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 GUCY2CP25092 1073 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 USP14P54578 494 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 UGCGQ16739 394 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 EXOC3L4Q17RC7 722 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 WHAMMP3Q1A5X7 153 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 ASTE1Q2TB18 679 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-202ENST00000399127 EAPPQ56P03 285 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-202ENST00000399127 ARHGEF16Q5VV41 709 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 SNRNP48Q6IEG0 339 aaKnown RBP12.88□□□□□ -0.35
COL25A1-202ENST00000399127 GJB7Q6PEY0 223 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 ZNF662Q6ZS27 426 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 RDH13Q8NBN7 331 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 PNKPQ96T60 521 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 PSMB7Q99436 277 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 EDEM3Q9BZQ6 932 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 ANKZF1Q9H8Y5 726 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 MYH10P35580 1976 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 TISP43B9A030 160 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 BUB1O43683 1085 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 SORBS3O60504 671 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 P4HBP07237 508 aaKnown RBP12.88□□□□□ -0.35
COL25A1-202ENST00000399127 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 PON1P27169 355 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 ZNF131P52739 623 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 MAPK7Q13164 816 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 FAM186BQ8IYM0 893 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 KCTD17Q8N5Z5 321 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 MMS19Q96T76 1030 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 PDCD2LQ9BRP1 358 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 AS3MTQ9HBK9 375 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 PXMP2Q9NR77 195 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 ADAMTS1Q9UHI8 967 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 ZNF112Q9UJU3 913 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 PPP2R3BQ9Y5P8 575 aa12.88□□□□□ -0.35
COL25A1-202ENST00000399127 EIF3DO15371 548 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL25A1-202ENST00000399127 LCA5LO95447 670 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 SERPING1P05155 500 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 PNMA6AP0CW24 399 aaPredicted RBP12.87□□□□□ -0.35
COL25A1-202ENST00000399127 UCHL3P15374 230 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 KLHL30Q0D2K2 578 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 DNAAF5Q86Y56 855 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 SYCP3Q8IZU3 236 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 GPATCH11Q8N954 259 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 SPAG5Q96R06 1193 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 GINM1Q9NU53 330 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 AJAP1Q9UKB5 411 aaPredicted RBP12.87□□□□□ -0.35
COL25A1-202ENST00000399127 PCNTO95613 3336 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 A0A087X0T9 212 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 FAM170AA1A519 330 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 K7ENM7 598 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 FAM228BP0C875 321 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 NAP1L1P55209 391 aaKnown RBP12.87□□□□□ -0.35
COL25A1-202ENST00000399127 SP4Q02446 784 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 TUBB2AQ13885 445 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 DPY19L2P1Q6NXN4 242 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 CC2D1AQ6P1N0 951 aaPredicted RBP12.87□□□□□ -0.35
COL25A1-202ENST00000399127 HS2ST1Q7LGA3 356 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms