RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 GTF2F1P35269 517 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL25A1-201ENST00000399126 CASP4P49662 377 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 FOXR2Q6PJQ5 311 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 ZNF720Q7Z2F6 126 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 CNGA4Q8IV77 575 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 NME8Q8N427 588 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 PRIMPOLQ96LW4 560 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 KCND2Q9NZV8 630 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 ARID2Q68CP9 1835 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 FGFR1OPO95684 399 aaKnown RBP16.65■□□□□ 0.26
COL25A1-201ENST00000399126 TNNT1P13805 278 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 EDNRBP24530 442 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 ERVK-9P63128 1117 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 ERVK-24P63145 666 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 NYAP1Q6ZVC0 841 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 GPIHBP1Q8IV16 184 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 ZC3H3Q8IXZ2 948 aaKnown RBP16.65■□□□□ 0.26
COL25A1-201ENST00000399126 PCMTD1Q96MG8 357 aaPredicted RBP16.65■□□□□ 0.26
COL25A1-201ENST00000399126 CCDC43Q96MW1 224 aaKnown RBP16.65■□□□□ 0.26
COL25A1-201ENST00000399126 SENP7Q9BQF6 1050 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 TTYH3Q9C0H2 523 aa16.65■□□□□ 0.26
COL25A1-201ENST00000399126 GBA2Q9HCG7 927 aaPredicted RBP16.65■□□□□ 0.26
COL25A1-201ENST00000399126 NFASCO94856 1347 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 A0A0U1RQJ8 604 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 BTBD19C9JJ37 291 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 STBD1O95210 358 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 UBA1P22314 1058 aaKnown RBP16.64■□□□□ 0.26
COL25A1-201ENST00000399126 EDRF1Q3B7T1 1238 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 ARMCX6Q7L4S7 300 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 ATRIPQ8WXE1 791 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 BRI3BPQ8WY22 251 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 CDHR1Q96JP9 859 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 CEP63Q96MT8 703 aa16.64■□□□□ 0.26
COL25A1-201ENST00000399126 GPBP1L1Q9HC44 474 aaPredicted RBP16.64■□□□□ 0.26
COL25A1-201ENST00000399126 FAM207AQ9NSI2 230 aaPredicted RBP16.64■□□□□ 0.26
COL25A1-201ENST00000399126 CCL15-CCL14A0A0B4J2E2 113 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 PDHXO00330 501 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 PDXKO00764 312 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 STAM2O75886 525 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 AKAP3O75969 853 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 NR3C1P04150 777 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 TRIM21P19474 475 aaKnown RBP16.64■□□□□ 0.25
COL25A1-201ENST00000399126 CCL15Q16663 113 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 ABHD15Q6UXT9 468 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 TSHZ1Q6ZSZ6 1077 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 ERGIC2Q96RQ1 377 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 KCND1Q9NSA2 647 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 TYW1Q9NV66 732 aaKnown RBP16.64■□□□□ 0.25
COL25A1-201ENST00000399126 SIK3Q9Y2K2 1263 aa16.64■□□□□ 0.25
COL25A1-201ENST00000399126 TISP43B9A030 160 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 SOCS7O14512 581 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 SLC25A27O95847 323 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 KCNJ6P48051 423 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 APBA1Q02410 837 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 NBPF20Q3BBV1 942 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 TMEM63BQ5T3F8 832 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 TRIM59Q8IWR1 403 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 ANKRD13CQ8N6S4 541 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 MMP19Q99542 508 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 K7ENM7 598 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 CETN3O15182 167 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 ARIH2O95376 493 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 TPM1P09493 284 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 FKBP15Q5T1M5 1219 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 CHP1Q99653 195 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 PPP2R2CQ9Y2T4 447 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 ICAM3P32942 547 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 PRKCEQ02156 737 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 TRIM14Q14142 442 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 LY6KQ17RY6 165 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 FAM102BQ5T8I3 360 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 REXO1L1PQ8IX06 675 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 KIFC3Q9BVG8 833 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 SEL1LQ9UBV2 794 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 CAPN11Q9UMQ6 739 aa16.63■□□□□ 0.25
COL25A1-201ENST00000399126 SYNGAP1Q96PV0 1343 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 EIF3DO15371 548 aaKnown RBP eCLIP16.62■□□□□ 0.25
COL25A1-201ENST00000399126 PPP1R37O75864 691 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 PSAPP07602 524 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 ATP4AP20648 1035 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 KCTD2Q14681 263 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 PTPN14Q15678 1187 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 RDM1Q8NG50 284 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 CEP170P1Q96L14 293 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 MAF1Q9H063 256 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 SEPT9Q9UHD8 586 aaPredicted RBP16.62■□□□□ 0.25
COL25A1-201ENST00000399126 LUC7L2Q9Y383 392 aaKnown RBP16.62■□□□□ 0.25
COL25A1-201ENST00000399126 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 CALUO43852 315 aaPredicted RBP16.62■□□□□ 0.25
COL25A1-201ENST00000399126 SUPT20HL2P0C7V6 817 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 PEX3P56589 373 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 KCNMA1Q12791 1236 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 CST9Q5W186 159 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 WDR59Q6PJI9 974 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 FBXO16Q8IX29 292 aaPredicted RBP16.62■□□□□ 0.25
COL25A1-201ENST00000399126 STRA6Q9BX79 667 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms