RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 COL20A1Q9P218 1284 aa19.39■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MAP2K7O14733 419 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 STAM2O75886 525 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 FERP16591 822 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 GMPSP49915 693 aaPredicted RBP19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MCCD1P59942 119 aaPredicted RBP19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 GFPT1Q06210 699 aaPredicted RBP19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 BEND6Q5SZJ8 279 aaPredicted RBP19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 RNF207Q6ZRF8 634 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 IRF2BP2Q7Z5L9 587 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MMGT1Q8N4V1 131 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 DRC1Q96MC2 740 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 SENP7Q9BQF6 1050 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 UBXN6Q9BZV1 441 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PICK1Q9NRD5 415 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 AGPAT3Q9NRZ7 376 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 HACL1Q9UJ83 578 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ZMYM2Q9UBW7 1377 aa19.38■□□□□ 0.69
HLA-DQB1-204ENST00000399084 VWA5AO00534 786 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ATP2A1O14983 1001 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 P4HA2O15460 535 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 N4BP1O75113 896 aaKnown RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 NMT1P30419 496 aaKnown RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 RPS6P62753 249 aaKnown RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PGM5Q15124 567 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ZNF280CQ8ND82 737 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CAGE1Q8TC20 777 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 GPRASP2Q96D09 838 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ACBD3Q9H3P7 528 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 RPAP3Q9H6T3 665 aaPredicted RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 RAVER2Q9HCJ3 691 aaKnown RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 KCNG1Q9UIX4 513 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ADAMTS5Q9UNA0 930 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ZHX2Q9Y6X8 837 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MYPNQ86TC9 1320 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 SFI1A8K8P3 1242 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 WDR64B1ANS9 1081 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CES2O00748 559 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 HIP1RO75146 1068 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 EIF3JO75822 258 aaKnown RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ERCC3P19447 782 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ABCD1P33897 745 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PAFAH1B1P43034 410 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 JAM2P57087 298 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PSMC5P62195 406 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MRPS9P82933 396 aaKnown RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 RASSF7Q02833 373 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MAPK7Q13164 816 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 DCAF17Q5H9S7 520 aaPredicted RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 TCERG1LQ5VWI1 586 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CPXCR1Q8N123 301 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 HVCN1Q96D96 273 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CDHR1Q96JP9 859 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 TRERF1Q96PN7 1200 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ACCSQ96QU6 501 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MMS19Q96T76 1030 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PDCD2LQ9BRP1 358 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 WRAP73Q9P2S5 460 aaPredicted RBP19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 HDAC6Q9UBN7 1215 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 L1RE1Q9UN81 338 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PCDHGC5Q9Y5F6 944 aa19.37■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PMM2O15305 246 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PLS3P13797 630 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 SLC9A1P19634 815 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 STAT1P42224 750 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PLA2G4AP47712 749 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 RARRES1P49788 294 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CETN1Q12798 172 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MTMR2Q13614 643 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ZNF746Q6NUN9 644 aaPredicted RBP19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 NLRX1Q86UT6 975 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CREG2Q8IUH2 290 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 SYCP3Q8IZU3 236 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 FAM133AQ8N9E0 248 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 RMDN3Q96TC7 470 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 STK33Q9BYT3 514 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 C17orf75Q9HAS0 396 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PXMP2Q9NR77 195 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 TFR2Q9UP52 801 aa19.36■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CLIC2O15247 247 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MOCS3O95396 460 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CCND2P30279 289 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 FMO5P49326 533 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CASP4P49662 377 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ITGB3BPQ13352 177 aaPredicted RBP19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 GLE1Q53GS7 698 aaKnown RBP19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 INTS8Q75QN2 995 aaKnown RBP19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 BANK1Q8NDB2 785 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 LMBR1Q8WVP7 490 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CALR3Q96L12 384 aaKnown RBP19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 OSBPL9Q96SU4 736 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 EPC1Q9H2F5 836 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 VIPAS39Q9H9C1 493 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 GCNT4Q9P109 453 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CAPN6Q9Y6Q1 641 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 DOCK1Q14185 1865 aa19.35■□□□□ 0.69
HLA-DQB1-204ENST00000399084 A0A0A6YYK5 440 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 KRT13P13646 458 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms