RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CXXC1Q9P0U4 656 aaPredicted RBP17.62■□□□□ 0.41
MBD1-207ENST00000398488 KIAA1024Q9UPX6 916 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 BMP15O95972 392 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 ERMNQ8TAM6 284 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 TMEM40Q8WWA1 233 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 DHX33Q9H6R0 707 aaKnown RBP17.62■□□□□ 0.41
MBD1-207ENST00000398488 TSHZ2Q9NRE2 1034 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 ANKEF1Q9NU02 776 aa17.62■□□□□ 0.41
MBD1-207ENST00000398488 DDX19AQ9NUU7 478 aaKnown RBP17.62■□□□□ 0.41
MBD1-207ENST00000398488 SRPRBQ9Y5M8 271 aaKnown RBP17.62■□□□□ 0.41
MBD1-207ENST00000398488 E9PMD0 336 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 CAND2O75155 1236 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 GPR32O75388 356 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 PDIA4P13667 645 aaKnown RBP17.61■□□□□ 0.41
MBD1-207ENST00000398488 LPIN1Q14693 890 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 ZRSR1Q15695 479 aaKnown RBP17.61■□□□□ 0.41
MBD1-207ENST00000398488 KIZQ2M2Z5 673 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 OTUD6AQ7L8S5 288 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 OTOP2Q7RTS6 562 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 KSR1Q8IVT5 923 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 TMEM143Q96AN5 459 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 EPSTI1Q96J88 318 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 CELF4Q9BZC1 486 aaKnown RBP17.61■□□□□ 0.41
MBD1-207ENST00000398488 ADAMTS10Q9H324 1103 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 AGO3Q9H9G7 860 aaKnown RBP17.61■□□□□ 0.41
MBD1-207ENST00000398488 POLD4Q9HCU8 107 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 TRPV2Q9Y5S1 764 aa17.61■□□□□ 0.41
MBD1-207ENST00000398488 LAMA3Q16787 3333 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 GHRP10912 638 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 RFC2P35250 354 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 FBXO47Q5MNV8 452 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 RASIP1Q5U651 963 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 KRT79Q5XKE5 535 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 HAUS3Q68CZ6 603 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 RSPH3Q86UC2 560 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 DBF4BQ8NFT6 615 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 ZNF396Q96N95 335 aaPredicted RBP17.6■□□□□ 0.41
MBD1-207ENST00000398488 NACC1Q96RE7 527 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 RAB34Q9BZG1 259 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 GINS2Q9Y248 185 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 TRIOBPQ9H2D6 2365 aa17.6■□□□□ 0.41
MBD1-207ENST00000398488 LAMA2P24043 3122 aaKnown RBP17.6■□□□□ 0.41
MBD1-207ENST00000398488 LOXHD1Q8IVV2 1947 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 FGBP02675 491 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 XRCC6P12956 609 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■■■■ 29.9
MBD1-207ENST00000398488 LONP1P36776 959 aaKnown RBP17.59■□□□□ 0.41
MBD1-207ENST00000398488 EMC2Q15006 297 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 STK38Q15208 465 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 PLEKHG4Q58EX7 1191 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 HYIQ5T013 277 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 FAM109BQ6ICB4 259 aaPredicted RBP17.59■□□□□ 0.41
MBD1-207ENST00000398488 CABP7Q86V35 215 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 RPUSD2Q8IZ73 545 aaKnown RBP17.59■□□□□ 0.41
MBD1-207ENST00000398488 TDHQ8IZJ6 230 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 NME8Q8N427 588 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 SUCLA2Q9P2R7 463 aaPredicted RBP17.59■□□□□ 0.41
MBD1-207ENST00000398488 DBR1Q9UK59 544 aaKnown RBP17.59■□□□□ 0.41
MBD1-207ENST00000398488 AKT3Q9Y243 479 aa17.59■□□□□ 0.41
MBD1-207ENST00000398488 MORC2Q9Y6X9 1032 aaPredicted RBP17.59■□□□□ 0.41
MBD1-207ENST00000398488 SPTLC2O15270 562 aa17.58■□□□□ 0.41
MBD1-207ENST00000398488 USO1O60763 962 aaKnown RBP17.58■□□□□ 0.41
MBD1-207ENST00000398488 GPC3P51654 580 aa17.58■□□□□ 0.41
MBD1-207ENST00000398488 POLGP54098 1239 aaPredicted RBP17.58■□□□□ 0.41
MBD1-207ENST00000398488 NLRP11P59045 1033 aaKnown RBP17.58■□□□□ 0.41
MBD1-207ENST00000398488 KARSQ15046 597 aaKnown RBP17.58■□□□□ 0.41
MBD1-207ENST00000398488 TMEM119Q4V9L6 283 aa17.58■□□□□ 0.41
MBD1-207ENST00000398488 IER5Q5VY09 327 aa17.58■□□□□ 0.41
MBD1-207ENST00000398488 HERVK_113Q902F9 699 aa17.58■□□□□ 0.41
MBD1-207ENST00000398488 OSMRQ99650 979 aa17.58■□□□□ 0.41
MBD1-207ENST00000398488 BHMT2Q9H2M3 363 aa17.58■□□□□ 0.41
MBD1-207ENST00000398488 GPRC5CQ9NQ84 441 aa17.58■□□□□ 0.41
MBD1-207ENST00000398488 NOC2LQ9Y3T9 749 aaKnown RBP17.58■□□□□ 0.41
MBD1-207ENST00000398488 RBM19Q9Y4C8 960 aaKnown RBP17.58■□□□□ 0.41
MBD1-207ENST00000398488 KDM3AQ9Y4C1 1321 aa17.58■□□□□ 0.4
MBD1-207ENST00000398488 CSDE1O75534 798 aaKnown RBP17.57■□□□□ 0.4
MBD1-207ENST00000398488 YEATS4O95619 227 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 MUTP22033 750 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 CD52P31358 61 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 RFC5P40937 340 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 AXDND1Q5T1B0 1012 aaPredicted RBP17.57■□□□□ 0.4
MBD1-207ENST00000398488 MAEAQ7L5Y9 396 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 SYMPKQ92797 1274 aaKnown RBP17.57■□□□□ 0.4
MBD1-207ENST00000398488 AK8Q96MA6 479 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 A0A087X0B3 334 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 GRXCR1A8MXD5 290 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 SOX1O00570 391 aaPredicted RBP17.57■□□□□ 0.4
MBD1-207ENST00000398488 PSRC1Q6PGN9 363 aaPredicted RBP17.57■□□□□ 0.4
MBD1-207ENST00000398488 PADI6Q6TGC4 694 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 TMCO2Q7Z6W1 182 aaPredicted RBP17.57■□□□□ 0.4
MBD1-207ENST00000398488 RHPN2Q8IUC4 686 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 KRI1Q8N9T8 703 aaKnown RBP17.57■□□□□ 0.4
MBD1-207ENST00000398488 ASAP3Q8TDY4 903 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 PRPF31Q8WWY3 499 aaKnown RBP17.57■□□□□ 0.4
MBD1-207ENST00000398488 SLC7A3Q8WY07 619 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 RNPC3Q96LT9 517 aaKnown RBP17.57■□□□□ 0.4
MBD1-207ENST00000398488 BLOC1S4Q9NUP1 217 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 RCOR1Q9UKL0 485 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 PPME1Q9Y570 386 aa17.57■□□□□ 0.4
MBD1-207ENST00000398488 A0A087WZ62 844 aa17.56■□□□□ 0.4
MBD1-207ENST00000398488 ARHGEF35A5YM69 484 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms