RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 PCDHB12Q9Y5F1 795 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 MYH9P35579 1960 aaKnown RBP13.67□□□□□ -0.22
TFF3-202ENST00000398431 GOLGA8AA7E2F4 631 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 GOLGA8BA8MQT2 603 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 FGF18O76093 207 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 VTNP04004 478 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 FGFR1P11362 822 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 MRE11P49959 708 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 DUSP6Q16828 381 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 BMP2KLQ5H9B9 411 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 MIS18BP1Q6P0N0 1132 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 LINC01465Q8N7H1 131 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 COLGALT1Q8NBJ5 622 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 MICAL1Q8TDZ2 1067 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 BBXQ8WY36 941 aaPredicted RBP13.67□□□□□ -0.22
TFF3-202ENST00000398431 SUSD6Q92537 303 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 MFSD14AQ96MC6 490 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 OSMRQ99650 979 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 ZMYND12Q9H0C1 365 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 S1PR5Q9H228 398 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 ELAC1Q9H777 363 aaKnown RBP13.67□□□□□ -0.22
TFF3-202ENST00000398431 TMEM161AQ9NX61 479 aa13.67□□□□□ -0.22
TFF3-202ENST00000398431 WDR81Q562E7 1941 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 ESYT2A0FGR8 921 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 DENND3A2RUS2 1198 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 CPA1P15085 419 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 CIITAP33076 1130 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 RCAN1P53805 252 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 ZXDAP98168 799 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 ODR4Q5SWX8 454 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 IER5LQ5T953 404 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 ZNF746Q6NUN9 644 aaPredicted RBP13.66□□□□□ -0.22
TFF3-202ENST00000398431 TMEM184AQ6ZMB5 413 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 TRIM67Q6ZTA4 783 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 TRMT1LQ7Z2T5 733 aaKnown RBP13.66□□□□□ -0.22
TFF3-202ENST00000398431 CASD1Q96PB1 797 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 ADAMTS10Q9H324 1103 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 TLR9Q9NR96 1032 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 AAASQ9NRG9 546 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 TBC1D22BQ9NU19 505 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 PCDHA10Q9Y5I2 948 aa13.66□□□□□ -0.22
TFF3-202ENST00000398431 ZNF862O60290 1169 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 ATF7P17544 494 aaPredicted RBP13.65□□□□□ -0.22
TFF3-202ENST00000398431 CLCN3P51790 818 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 APOBRQ0VD83 1088 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 SPOUT1Q5T280 376 aaKnown RBP13.65□□□□□ -0.22
TFF3-202ENST00000398431 SYCE2Q6PIF2 218 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 METTL13Q8N6R0 699 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 MRPS27Q92552 414 aaKnown RBP13.65□□□□□ -0.22
TFF3-202ENST00000398431 KCNB2Q92953 911 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 LENG9Q96B70 501 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 PHOX2BQ99453 314 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.22
TFF3-202ENST00000398431 ATP6V0A4Q9HBG4 840 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 GABBR1Q9UBS5 961 aa13.65□□□□□ -0.22
TFF3-202ENST00000398431 TMEM221A6NGB7 291 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 M0R296 226 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 PRPF3O43395 683 aaKnown RBP13.64□□□□□ -0.23
TFF3-202ENST00000398431 PSAPP07602 524 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 NLRP11P59045 1033 aaKnown RBP13.64□□□□□ -0.23
TFF3-202ENST00000398431 NTRK3Q16288 839 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 PRR16Q569H4 304 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 PDE12Q6L8Q7 609 aaKnown RBP13.64□□□□□ -0.23
TFF3-202ENST00000398431 EFCAB12Q6NXP0 572 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 CKAP2LQ8IYA6 745 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 SMAP1Q8IYB5 467 aaPredicted RBP13.64□□□□□ -0.23
TFF3-202ENST00000398431 THNSL1Q8IYQ7 743 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 PRSS33Q8NF86 280 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 RASGRP4Q8TDF6 673 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 PBXIP1Q96AQ6 731 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 RPGRIP1Q96KN7 1286 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 CDCA3Q99618 268 aaPredicted RBP13.64□□□□□ -0.23
TFF3-202ENST00000398431 TMEM117Q9H0C3 514 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 C6orf50Q9HD87 102 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
TFF3-202ENST00000398431 LZTS1Q9Y250 596 aa13.64□□□□□ -0.23
TFF3-202ENST00000398431 HIDE1A8MVS5 230 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 MAGEB2O15479 319 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 LAG3P18627 525 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 EIF4BP23588 611 aaKnown RBP13.63□□□□□ -0.23
TFF3-202ENST00000398431 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.23
TFF3-202ENST00000398431 KRT32Q14532 448 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 ANKRD54Q6NXT1 300 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 KCNT2Q6UVM3 1135 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 Q6ZUG5 572 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 ECHDC2Q86YB7 292 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 ZNF668Q96K58 619 aaPredicted RBP13.63□□□□□ -0.23
TFF3-202ENST00000398431 WDFY4Q6ZS81 3184 aa13.63□□□□□ -0.23
TFF3-202ENST00000398431 STBD1O95210 358 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 HMGB1P09429 215 aaKnown RBP13.62□□□□□ -0.23
TFF3-202ENST00000398431 PBX3P40426 434 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
TFF3-202ENST00000398431 UGCGQ16739 394 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 CLLU1OSQ5K130 101 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 PLPP4Q5VZY2 271 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 MCTP2Q6DN12 878 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms