RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 KIAA1755Q5JYT7 1200 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 GSDMBQ8TAX9 411 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 EHD2Q9NZN4 543 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 LCMT1Q9UIC8 334 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 ARL2BPQ9Y2Y0 163 aa11.89□□□□□ -0.51
HPS4-202ENST00000398145 NPHP4O75161 1426 aaPredicted RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 TESPA1A2RU30 521 aaPredicted RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 USP17L5A8MUK1 530 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 PDHA1P08559 390 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 ANXA13P27216 316 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 PPP2R5DQ14738 602 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 RNF207Q6ZRF8 634 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 ZC3H18Q86VM9 953 aaKnown RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 DDX42Q86XP3 938 aaKnown RBP eCLIP11.88□□□□□ -0.51
HPS4-202ENST00000398145 PDIK1LQ8N165 341 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 SH3RF3Q8TEJ3 882 aaPredicted RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 PYROXD1Q8WU10 500 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 HOOK2Q96ED9 719 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 ANAPC7Q9UJX3 599 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 PCDHB4Q9Y5E5 795 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 A0A0G2JND7 137 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 FTLP02792 175 aaPredicted RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 PLEKP08567 350 aaPredicted RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 ABCB5Q2M3G0 1257 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 GNPTABQ3T906 1256 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 FIGNQ5HY92 759 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 PPP1R2P3Q6NXS1 205 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 FRMD5Q7Z6J6 570 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 ZNF526Q8TF50 670 aaPredicted RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 TMEM60Q9H2L4 133 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 SAYSD1Q9NPB0 183 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 CNOT8Q9UFF9 292 aaKnown RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 CCT8L1PA6NM43 557 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 TCP11X1B4DZS4 312 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 H7C0C1 242 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 IPO5O00410 1097 aaKnown RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 GMNNO75496 209 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 HSPA9P38646 679 aaKnown RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 PIK3CAP42336 1068 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 ATP5OP48047 213 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 SARSP49591 514 aaKnown RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 SLC8A3P57103 927 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 KRT81Q14533 505 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 PLCB4Q15147 1175 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 NTRK3Q16288 839 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 SPATA21Q7Z572 469 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 RNF168Q8IYW5 571 aaPredicted RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 INTUQ9ULD6 942 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 MINPP1Q9UNW1 487 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 USP15Q9Y4E8 981 aaPredicted RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 PFASO15067 1338 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 SALL1Q9NSC2 1324 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 DIAPH2O60879 1101 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 KRT1P04264 644 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 PLS3P13797 630 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 BBS9Q3SYG4 887 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 LRRC23Q53EV4 343 aaPredicted RBP11.88□□□□□ -0.51
HPS4-202ENST00000398145 CYB5D1Q6P9G0 228 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 TRPM8Q7Z2W7 1104 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 ZNF354CQ86Y25 554 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 TRIM59Q8IWR1 403 aa11.88□□□□□ -0.51
HPS4-202ENST00000398145 TMEM94Q12767 1356 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 RAD23BP54727 409 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 UBXN2AP68543 259 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 AP3B2Q13367 1082 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 NT5DC1Q5TFE4 455 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 SCYL2Q6P3W7 929 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 KIAA0825Q8IV33 1275 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 PIGOQ8TEQ8 1089 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 NUDCD1Q96RS6 583 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 PRMT1Q99873 361 aaKnown RBP11.87□□□□□ -0.51
HPS4-202ENST00000398145 CD248Q9HCU0 757 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 MYMKA6NI61 221 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 ZBTB5O15062 677 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 ZBED4O75132 1171 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 UCHL3P15374 230 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 CTTNQ14247 550 aaKnown RBP11.87□□□□□ -0.51
HPS4-202ENST00000398145 TBC1D10BQ4KMP7 808 aaPredicted RBP11.87□□□□□ -0.51
HPS4-202ENST00000398145 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 CEP95Q96GE4 821 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 TRIM51Q9BSJ1 452 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 CD163L1Q9NR16 1453 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 OVOS2A0A0G2JMS6 1433 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 POTEFA5A3E0 1075 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 GGPS1O95749 300 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 POTEIP0CG38 1075 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 ALAS1P13196 640 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 HSD17B3P37058 310 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 USP11P51784 963 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 HERVK_113P62684 666 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 TROAPQ12815 778 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 ALCAMQ13740 583 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 POTEEQ6S8J3 1075 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 RPUSD2Q8IZ73 545 aaKnown RBP11.87□□□□□ -0.51
HPS4-202ENST00000398145 SPICE1Q8N0Z3 855 aa11.87□□□□□ -0.51
HPS4-202ENST00000398145 C3orf20Q8ND61 904 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms