RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 XIRP2A4UGR9 3374 aa28.48■■■□□ 2.15
U2AF1-203ENST00000398137 VWA3AA6NCI4 1184 aa28.48■■■□□ 2.15
U2AF1-203ENST00000398137 LPXNO60711 386 aa28.48■■■□□ 2.15
U2AF1-203ENST00000398137 ARNTL2Q8WYA1 636 aa28.48■■■□□ 2.15
U2AF1-203ENST00000398137 MAFBQ9Y5Q3 323 aaPredicted RBP28.48■■■□□ 2.15
U2AF1-203ENST00000398137 MTCH2Q9Y6C9 303 aa28.48■■■□□ 2.15
U2AF1-203ENST00000398137 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.47■■■□□ 2.15
U2AF1-203ENST00000398137 MARCKSP29966 332 aaPredicted RBP28.47■■■□□ 2.15
U2AF1-203ENST00000398137 CYP4A11Q02928 519 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 PLCB4Q15147 1175 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 STK38Q15208 465 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 FAM117BQ6P1L5 589 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 CKAP2LQ8IYA6 745 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 DYDC2Q96IM9 177 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 RAD9AQ99638 391 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 EIF2AK1Q9BQI3 630 aaKnown RBP28.47■■■□□ 2.15
U2AF1-203ENST00000398137 RGL1Q9NZL6 768 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 TUBE1Q9UJT0 475 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 TRPC6Q9Y210 931 aa28.47■■■□□ 2.15
U2AF1-203ENST00000398137 ZNF862O60290 1169 aa28.46■■■□□ 2.15
U2AF1-203ENST00000398137 INSRRP14616 1297 aa28.46■■■□□ 2.15
U2AF1-203ENST00000398137 PRKCEQ02156 737 aa28.46■■■□□ 2.15
U2AF1-203ENST00000398137 SLC39A14Q15043 492 aa28.46■■■□□ 2.15
U2AF1-203ENST00000398137 TRMT1LQ7Z2T5 733 aaKnown RBP28.46■■■□□ 2.15
U2AF1-203ENST00000398137 ZBED2Q9BTP6 218 aa28.46■■■□□ 2.15
U2AF1-203ENST00000398137 RAB34Q9BZG1 259 aa28.46■■■□□ 2.15
U2AF1-203ENST00000398137 LRWD1Q9UFC0 647 aa28.46■■■□□ 2.15
U2AF1-203ENST00000398137 ATP6V1DQ9Y5K8 247 aa28.46■■■□□ 2.15
U2AF1-203ENST00000398137 LINC01553A4QN01 128 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 PP2D1A8MPX8 630 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 NCLP19338 710 aaKnown RBP28.45■■■□□ 2.14
U2AF1-203ENST00000398137 ATP4AP20648 1035 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 SLC26A2P50443 739 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 GRIN1Q05586 938 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 CTTNQ14247 550 aaKnown RBP28.45■■■□□ 2.14
U2AF1-203ENST00000398137 ATL3Q6DD88 541 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 TAF2Q6P1X5 1199 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 IGSF22Q8N9C0 903 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 LINC00301Q8NCQ3 95 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 DNAJB3Q8WWF6 145 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 SEPT8Q92599 483 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 LXNQ9BS40 222 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 WDR81Q562E7 1941 aa28.45■■■□□ 2.14
U2AF1-203ENST00000398137 POTEB3A0JP26 581 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 YEATS4O95619 227 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 P4HBP07237 508 aaKnown RBP28.44■■■□□ 2.14
U2AF1-203ENST00000398137 QARSP47897 775 aaKnown RBP28.44■■■□□ 2.14
U2AF1-203ENST00000398137 PSMC5P62195 406 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 IGBP1P78318 339 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 HTRA4P83105 476 aaPredicted RBP28.44■■■□□ 2.14
U2AF1-203ENST00000398137 GRB10Q13322 594 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 POTEBQ6S5H4 581 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 MYOCDQ8IZQ8 938 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 ERMNQ8TAM6 284 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 ATP8B4Q8TF62 1192 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 TRAPPC12Q8WVT3 735 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 CHMP5Q9NZZ3 219 aa28.44■■■□□ 2.14
U2AF1-203ENST00000398137 WRAP73Q9P2S5 460 aaPredicted RBP28.44■■■□□ 2.14
U2AF1-203ENST00000398137 FBXO2Q9UK22 296 aaPredicted RBP28.44■■■□□ 2.14
U2AF1-203ENST00000398137 LOXHD1Q8IVV2 1947 aa28.43■■■□□ 2.14
U2AF1-203ENST00000398137 MYH9P35579 1960 aaKnown RBP28.43■■■□□ 2.14
U2AF1-203ENST00000398137 PDIA5Q14554 519 aa28.43■■■□□ 2.14
U2AF1-203ENST00000398137 NEK9Q8TD19 979 aa28.43■■■□□ 2.14
U2AF1-203ENST00000398137 CFAP45Q9UL16 551 aa28.43■■■□□ 2.14
U2AF1-203ENST00000398137 MUC3AQ02505 3323 aa28.43■■■□□ 2.14
U2AF1-203ENST00000398137 SPTLC2O15270 562 aa28.42■■■□□ 2.14
U2AF1-203ENST00000398137 AMHP03971 560 aa28.42■■■□□ 2.14
U2AF1-203ENST00000398137 OATP04181 439 aa28.42■■■□□ 2.14
U2AF1-203ENST00000398137 GHRP10912 638 aa28.42■■■□□ 2.14
U2AF1-203ENST00000398137 LPIN1Q14693 890 aa28.42■■■□□ 2.14
U2AF1-203ENST00000398137 TPH2Q8IWU9 490 aa28.42■■■□□ 2.14
U2AF1-203ENST00000398137 SP7Q8TDD2 431 aaPredicted RBP28.42■■■□□ 2.14
U2AF1-203ENST00000398137 TOP1MTQ969P6 601 aa28.42■■■□□ 2.14
U2AF1-203ENST00000398137 FAM167AQ96KS9 214 aa28.42■■■□□ 2.14
U2AF1-203ENST00000398137 HSD17B14Q9BPX1 270 aa28.42■■■□□ 2.14
U2AF1-203ENST00000398137 IFIH1Q9BYX4 1025 aaKnown RBP28.42■■■□□ 2.14
U2AF1-203ENST00000398137 MORC2Q9Y6X9 1032 aaPredicted RBP28.42■■■□□ 2.14
U2AF1-203ENST00000398137 RRN3P2A6NIE6 340 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 MED24O75448 989 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 SLITRK3O94933 977 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 CDC25AP30304 524 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 ERVK-21P61565 698 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 KRT85P78386 507 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 HAUS3Q68CZ6 603 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 MICALL1Q8N3F8 863 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 SNX29Q8TEQ0 813 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 SUGCTQ9HAC7 445 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 CDY2AQ9Y6F7 541 aa28.41■■■□□ 2.14
U2AF1-203ENST00000398137 TMEM150BA6NC51 233 aa28.4■■■□□ 2.14
U2AF1-203ENST00000398137 HBP1O60381 514 aa28.4■■■□□ 2.14
U2AF1-203ENST00000398137 SPATA31C1P0DKV0 1188 aa28.4■■■□□ 2.14
U2AF1-203ENST00000398137 CCT6AP40227 531 aaKnown RBP28.4■■■□□ 2.14
U2AF1-203ENST00000398137 FBXO47Q5MNV8 452 aa28.4■■■□□ 2.14
U2AF1-203ENST00000398137 KRI1Q8N9T8 703 aaKnown RBP28.4■■■□□ 2.14
U2AF1-203ENST00000398137 GDPD5Q8WTR4 605 aa28.4■■■□□ 2.14
U2AF1-203ENST00000398137 BBXQ8WY36 941 aaPredicted RBP28.4■■■□□ 2.14
U2AF1-203ENST00000398137 CLIC6Q96NY7 704 aa28.4■■■□□ 2.14
U2AF1-203ENST00000398137 ZSWIM4Q9H7M6 989 aa28.4■■■□□ 2.14
U2AF1-203ENST00000398137 TUFT1Q9NNX1 390 aa28.4■■■□□ 2.14
U2AF1-203ENST00000398137 THEGQ9P2T0 379 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms