RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ZNF571Q7Z3V5 609 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 ADGRF4Q8IZF3 695 aa17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 ZBTB10Q96DT7 871 aa17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 KCTD10Q9H3F6 313 aa17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 CORO1CQ9ULV4 474 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 LIN7AO14910 233 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 PPIP5K2O43314 1243 aa17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 TRIM37O94972 964 aa17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 SLC9A1P19634 815 aa17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 GKAP1Q5VSY0 366 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 SPDYE1Q8NFV5 336 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 TBC1D16Q8TBP0 767 aa17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 CRAMP1Q96RY5 1269 aa17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 SLC12A6Q9UHW9 1150 aa17.38■□□□□ 0.37
CHMP1A-201ENST00000397901 ATP2C2O75185 946 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 KIF4AO95239 1232 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 ANP32DO95626 131 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 NR2F2P24468 414 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 HSPA9P38646 679 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 STAT3P40763 770 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 PPP1R7Q15435 360 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 KRT27Q7Z3Y8 459 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 HDAC9Q9UKV0 1011 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 ENO4A6NNW6 628 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 MYBP10242 640 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 CASP5P51878 434 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 MFSD14BQ5SR56 506 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 TMEM59LQ9UK28 342 aa17.37■□□□□ 0.37
CHMP1A-201ENST00000397901 GCOM1H8Y6P7 765 aaPredicted RBP17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 CETN3O15182 167 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 PAEPP09466 180 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 MYZAPP0CAP1 466 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 CYP11B2P19099 503 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 ECHS1P30084 290 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 HOXA7P31268 230 aaPredicted RBP17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 HSD17B3P37058 310 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 NOVP48745 357 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 RPS6KA3P51812 740 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 MARSP56192 900 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 NT5C3AQ9H0P0 336 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 DDX47Q9H0S4 455 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 ISCUQ9H1K1 167 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 KDM3AQ9Y4C1 1321 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 PLCG2P16885 1265 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 CLK2P49760 499 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 USP11P51784 963 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 IRF2BP2Q7Z5L9 587 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 NEUROG2Q9H2A3 272 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 PLCB1Q9NQ66 1216 aa17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 NOP53Q9NZM5 478 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-201ENST00000397901 ANKRD31Q8N7Z5 1873 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 MYH4Q9Y623 1939 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 POTEFA5A3E0 1075 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L10C9JJH3 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 GSTA1P08263 222 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 POTEIP0CG38 1075 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 ZNF543Q08ER8 600 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 BIRC3Q13489 604 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 UAP1Q16222 522 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 POTEGQ6S5H5 508 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 POTEEQ6S8J3 1075 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 KCTD1Q719H9 257 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 PSTPIP2Q9H939 334 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L15C9J2P7 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L13C9JLJ4 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L11C9JVI0 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L18D6R9N7 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L22D6RA61 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L17D6RBQ6 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L19D6RCP7 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L20D6RJB6 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 UCHL3P15374 230 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 RAB27AP51159 221 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L24Q0WX57 530 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 PDCD2Q16342 344 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 DCAF17Q5H9S7 520 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 USP17L6PQ6QN14 398 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 CCDC63Q8NA47 563 aa17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 NOC2LQ9Y3T9 749 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-201ENST00000397901 FAM170AA1A519 330 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 MYH7BA7E2Y1 1941 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 AHCYL1O43865 530 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 MED24O75448 989 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 ARSHQ5FYA8 562 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 HYIQ5T013 277 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 ALKBH5Q6P6C2 394 aaKnown RBP17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 CPLX4Q7Z7G2 160 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 SCFD2Q8WU76 684 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 NAGPAQ9UK23 515 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 GAKO14976 1311 aa17.34■□□□□ 0.37
CHMP1A-201ENST00000397901 CCT8L1PA6NM43 557 aa17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 MEIS1O00470 390 aa17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 SART1O43290 800 aaKnown RBP17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 RAD21O60216 631 aa17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 FESP07332 822 aa17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 ITGA4P13612 1032 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms