RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 KLRC1P26715 233 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 RANBP1P43487 201 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 GCLCP48506 637 aaPredicted RBP5.46□□□□□ -1.53
SSR1-202ENST00000397511 ZNF543Q08ER8 600 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 SF3A3Q12874 501 aaKnown RBP eCLIP5.46□□□□□ -1.53
SSR1-202ENST00000397511 SEPT2Q15019 361 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 QRICH1Q2TAL8 776 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 GLE1Q53GS7 698 aaKnown RBP5.46□□□□□ -1.53
SSR1-202ENST00000397511 RC3H1Q5TC82 1133 aaKnown RBP5.46□□□□□ -1.53
SSR1-202ENST00000397511 ARMC3Q5W041 872 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 LRRC55Q6ZSA7 311 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 ARMC9Q7Z3E5 817 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 SPATA21Q7Z572 469 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 ADAT2Q7Z6V5 191 aaKnown RBP5.46□□□□□ -1.53
SSR1-202ENST00000397511 ANKRD23Q86SG2 305 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 NME8Q8N427 588 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 CAVIN3Q969G5 261 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 ZIM3Q96PE6 472 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 ERGIC2Q96RQ1 377 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 P2RX7Q99572 595 aaKnown RBP5.46□□□□□ -1.53
SSR1-202ENST00000397511 TSG101Q99816 390 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 OSBPL7Q9BZF2 842 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 EMILIN3Q9NT22 766 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 NFU1Q9UMS0 254 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 PCDHB13Q9Y5F0 798 aa5.46□□□□□ -1.53
SSR1-202ENST00000397511 DDX60LQ5H9U9 1706 aaKnown RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 DLEC1Q9Y238 1755 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 PNMA6FA0A0J9YX94 578 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 GMNCA6NCL1 334 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 HMGB1P1B2RPK0 211 aaPredicted RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 PPEF1O14829 653 aaPredicted RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 ATP2C2O75185 946 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 SMIM24O75264 130 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 KIF4AO95239 1232 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 MYL1P05976 194 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 IMPDH2P12268 514 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 IL1R1P14778 569 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 PLCG2P16885 1265 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 ATP2B4P23634 1241 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 SHMT1P34896 483 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 FKBP3Q00688 224 aaKnown RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 GUCY2DQ02846 1103 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 RIPK1Q13546 671 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 BLMHQ13867 455 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 PDIA5Q14554 519 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 LLGL1Q15334 1064 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 PPP1R7Q15435 360 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 HHATQ5VTY9 493 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 HIBCHQ6NVY1 386 aaPredicted RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 CDC42EP5Q6NZY7 148 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 C8orf74Q6P047 294 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 MMGT1Q8N4V1 131 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 HVCN1Q96D96 273 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 DNAJC19Q96DA6 116 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 CUEDC2Q9H467 287 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 PPANQ9NQ55 473 aaKnown RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 COL4A3BPQ9Y5P4 624 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 SMCHD1A6NHR9 2005 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 ROBO3Q96MS0 1386 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 GOLGA6L10A6NI86 522 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 UNCXA6NJT0 531 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 ZBTB5O15062 677 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 FAM153BP0C7A2 387 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 MYBP10242 640 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 POLD1P28340 1107 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 ZNF76P36508 570 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 CARSP49589 748 aaKnown RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 CASP4P49662 377 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 KLHL30Q0D2K2 578 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 KCNH2Q12809 1159 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 VPS72Q15906 364 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 CDC37Q16543 378 aaPredicted RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 FAM153CQ494X1 144 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 SLC9C1Q4G0N8 1177 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 SFMBT2Q5VUG0 894 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 ARHGAP22Q7Z5H3 698 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 CCDC84Q86UT8 332 aaPredicted RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 CATSPER3Q86XQ3 398 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 APLFQ8IW19 511 aaPredicted RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 ANKRD13AQ8IZ07 590 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 GUF1Q8N442 669 aaKnown RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 TSEN2Q8NCE0 465 aaKnown RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 SCFD1Q8WVM8 642 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 BAP1Q92560 729 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 KRT12Q99456 494 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 TLR10Q9BXR5 811 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 AP1M1Q9BXS5 423 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 BHMT2Q9H2M3 363 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 KDM4CQ9H3R0 1056 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 DNAJC18Q9H819 358 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 EPB41L5Q9HCM4 733 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 SEPT11Q9NVA2 429 aaKnown RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 ZFATQ9P243 1243 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 CHORDC1Q9UHD1 332 aaPredicted RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 FAM153AQ9UHL3 310 aa5.46□□□□□ -1.54
SSR1-202ENST00000397511 COL5A3P25940 1745 aaPredicted RBP5.46□□□□□ -1.54
SSR1-202ENST00000397511 NAV1Q8NEY1 1877 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 ANO9A1A5B4 782 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 DDX39AO00148 427 aaKnown RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 TOM1O60784 492 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms