RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 MUC6Q6W4X9 2439 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 ESYT2A0FGR8 921 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 CIITAP33076 1130 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 ADD1P35611 737 aaKnown RBP13.55□□□□□ -0.24
SYNE4-203ENST00000397428 ZXDAP98168 799 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 PLCB3Q01970 1234 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 PKN1Q16512 942 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 KIZQ2M2Z5 673 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 BMP2KLQ5H9B9 411 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 JAKMIP3Q5VZ66 844 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 ZNF746Q6NUN9 644 aaPredicted RBP13.55□□□□□ -0.24
SYNE4-203ENST00000397428 LRRC55Q6ZSA7 311 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 ZNF710Q8N1W2 664 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 COLGALT1Q8NBJ5 622 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 VN1R2Q8NFZ6 395 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 RASGRP4Q8TDF6 673 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 CDCA3Q99618 268 aaPredicted RBP13.55□□□□□ -0.24
SYNE4-203ENST00000397428 PHF7Q9BWX1 381 aaPredicted RBP13.55□□□□□ -0.24
SYNE4-203ENST00000397428 S1PR5Q9H228 398 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 ATP6V0A4Q9HBG4 840 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 TLR9Q9NR96 1032 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 LZTS1Q9Y250 596 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 PCDHA10Q9Y5I2 948 aa13.55□□□□□ -0.24
SYNE4-203ENST00000397428 EVPLQ92817 2033 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 KLF18A0A0U1RQI7 1052 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 FSD2A1L4K1 749 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 TMEM221A6NGB7 291 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 M0R296 226 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 MAGEB2O15479 319 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 EDIL3O43854 480 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 HMGB1P09429 215 aaKnown RBP13.54□□□□□ -0.24
SYNE4-203ENST00000397428 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
SYNE4-203ENST00000397428 SPOUT1Q5T280 376 aaKnown RBP13.54□□□□□ -0.24
SYNE4-203ENST00000397428 FAM228AQ86W67 206 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 SMAP1Q8IYB5 467 aaPredicted RBP13.54□□□□□ -0.24
SYNE4-203ENST00000397428 LINC01465Q8N7H1 131 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 CASD1Q96PB1 797 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 ADAMTS10Q9H324 1103 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 RNF19AQ9NV58 838 aa13.54□□□□□ -0.24
SYNE4-203ENST00000397428 GOLGA8AA7E2F4 631 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 GOLGA8BA8MQT2 603 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 PRPF3O43395 683 aaKnown RBP13.53□□□□□ -0.24
SYNE4-203ENST00000397428 VTNP04004 478 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 PSAPP07602 524 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 FGFR1P11362 822 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 LAG3P18627 525 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 EIF4BP23588 611 aaKnown RBP13.53□□□□□ -0.24
SYNE4-203ENST00000397428 KRT32Q14532 448 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 IER5LQ5T953 404 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 CKAP2LQ8IYA6 745 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 METTL13Q8N6R0 699 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 MRPS27Q92552 414 aaKnown RBP13.53□□□□□ -0.24
SYNE4-203ENST00000397428 KCNB2Q92953 911 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 OSMRQ99650 979 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 TMEM117Q9H0C3 514 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 C6orf50Q9HD87 102 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 HCSTQ9UBK5 93 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 PUF60Q9UHX1 559 aaKnown RBP13.53□□□□□ -0.24
SYNE4-203ENST00000397428 CEP131Q9UPN4 1083 aa13.53□□□□□ -0.24
SYNE4-203ENST00000397428 CCDC196A0A1B0GTZ2 297 aa13.52□□□□□ -0.25
SYNE4-203ENST00000397428 NLRP11P59045 1033 aaKnown RBP13.52□□□□□ -0.25
SYNE4-203ENST00000397428 EFCAB12Q6NXP0 572 aa13.52□□□□□ -0.25
SYNE4-203ENST00000397428 SYCE2Q6PIF2 218 aa13.52□□□□□ -0.25
SYNE4-203ENST00000397428 THNSL1Q8IYQ7 743 aa13.52□□□□□ -0.25
SYNE4-203ENST00000397428 FBXL16Q8N461 479 aa13.52□□□□□ -0.25
SYNE4-203ENST00000397428 LENG9Q96B70 501 aa13.52□□□□□ -0.25
SYNE4-203ENST00000397428 NRBP2Q9NSY0 501 aa13.52□□□□□ -0.25
SYNE4-203ENST00000397428 GABBR1Q9UBS5 961 aa13.52□□□□□ -0.25
SYNE4-203ENST00000397428 TECTAO75443 2155 aa13.52□□□□□ -0.25
SYNE4-203ENST00000397428 PIEZO1Q92508 2521 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 ZNF318Q5VUA4 2279 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 HOXA2O43364 376 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 ZNF862O60290 1169 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 EOMESO95936 686 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 HOXB8P17481 243 aaPredicted RBP13.51□□□□□ -0.25
SYNE4-203ENST00000397428 IBSPP21815 317 aaPredicted RBP13.51□□□□□ -0.25
SYNE4-203ENST00000397428 GNA11P29992 359 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 USP11P51784 963 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 SETQ01105 290 aaPredicted RBP13.51□□□□□ -0.25
SYNE4-203ENST00000397428 PRR16Q569H4 304 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 ANKRD54Q6NXT1 300 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 KCNT2Q6UVM3 1135 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 ECHDC2Q86YB7 292 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 REXO1Q8N1G1 1221 aaKnown RBP13.51□□□□□ -0.25
SYNE4-203ENST00000397428 FBXL6Q8N531 539 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 MRPL43Q8N983 215 aaKnown RBP13.51□□□□□ -0.25
SYNE4-203ENST00000397428 PRSS33Q8NF86 280 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 CCDC12Q8WUD4 166 aaPredicted RBP13.51□□□□□ -0.25
SYNE4-203ENST00000397428 RPGRIP1Q96KN7 1286 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 PPP1R16BQ96T49 567 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 PRRX2Q99811 253 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 NGRNQ9NPE2 291 aaKnown RBP13.51□□□□□ -0.25
SYNE4-203ENST00000397428 SPG21Q9NZD8 308 aa13.51□□□□□ -0.25
SYNE4-203ENST00000397428 MYH9P35579 1960 aaKnown RBP13.51□□□□□ -0.25
SYNE4-203ENST00000397428 A0A0U1RQF3 1178 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 HIDE1A8MVS5 230 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 ZSCAN20P17040 1043 aaPredicted RBP13.5□□□□□ -0.25
SYNE4-203ENST00000397428 TMOD1P28289 359 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms