RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 METAP2P50579 478 aaKnown RBP eCLIP15.06■□□□□ 0
RPA3-202ENST00000396682 ERVFC1P60507 584 aa15.06■□□□□ 0
RPA3-202ENST00000396682 SETQ01105 290 aaPredicted RBP15.06■□□□□ 0
RPA3-202ENST00000396682 UBE3AQ05086 875 aa15.06■□□□□ 0
RPA3-202ENST00000396682 FAM43BQ6ZT52 329 aaPredicted RBP15.06■□□□□ 0
RPA3-202ENST00000396682 TRMT1LQ7Z2T5 733 aaKnown RBP15.06■□□□□ 0
RPA3-202ENST00000396682 CKAP2LQ8IYA6 745 aa15.06■□□□□ 0
RPA3-202ENST00000396682 REXO1Q8N1G1 1221 aaKnown RBP15.06■□□□□ 0
RPA3-202ENST00000396682 METTL13Q8N6R0 699 aa15.06■□□□□ 0
RPA3-202ENST00000396682 LINC01465Q8N7H1 131 aa15.06■□□□□ 0
RPA3-202ENST00000396682 RASGRP4Q8TDF6 673 aa15.06■□□□□ 0
RPA3-202ENST00000396682 KCNB2Q92953 911 aa15.06■□□□□ 0
RPA3-202ENST00000396682 FBXL18Q96ME1 805 aa15.06■□□□□ 0
RPA3-202ENST00000396682 CWH43Q9H720 699 aa15.06■□□□□ 0
RPA3-202ENST00000396682 TLR9Q9NR96 1032 aa15.06■□□□□ 0
RPA3-202ENST00000396682 TBC1D22BQ9NU19 505 aa15.06■□□□□ 0
RPA3-202ENST00000396682 TYW1Q9NV66 732 aaKnown RBP15.06■□□□□ 0
RPA3-202ENST00000396682 NAP1L2Q9ULW6 460 aaPredicted RBP15.06■□□□□ 0
RPA3-202ENST00000396682 PCDHB12Q9Y5F1 795 aa15.06■□□□□ 0
RPA3-202ENST00000396682 LOC730098B7Z3J9 87 aa15.05■□□□□ -0
RPA3-202ENST00000396682 FSCN2O14926 492 aa15.05■□□□□ -0
RPA3-202ENST00000396682 CDC45O75419 566 aa15.05■□□□□ -0
RPA3-202ENST00000396682 HMGB1P09429 215 aaKnown RBP15.05■□□□□ -0
RPA3-202ENST00000396682 CIITAP33076 1130 aa15.05■□□□□ -0
RPA3-202ENST00000396682 CLCN3P51790 818 aa15.05■□□□□ -0
RPA3-202ENST00000396682 PRR16Q569H4 304 aa15.05■□□□□ -0
RPA3-202ENST00000396682 SPOUT1Q5T280 376 aaKnown RBP15.05■□□□□ -0
RPA3-202ENST00000396682 Q6ZUG5 572 aa15.05■□□□□ -0
RPA3-202ENST00000396682 ALYREFQ86V81 257 aaKnown RBP15.05■□□□□ -0
RPA3-202ENST00000396682 SMAP1Q8IYB5 467 aaPredicted RBP15.05■□□□□ -0
RPA3-202ENST00000396682 COLGALT1Q8NBJ5 622 aa15.05■□□□□ -0
RPA3-202ENST00000396682 BRF1Q92994 677 aa15.05■□□□□ -0
RPA3-202ENST00000396682 TLE6Q9H808 572 aa15.05■□□□□ -0
RPA3-202ENST00000396682 RNF19AQ9NV58 838 aa15.05■□□□□ -0
RPA3-202ENST00000396682 TMEM161AQ9NX61 479 aa15.05■□□□□ -0
RPA3-202ENST00000396682 GABBR1Q9UBS5 961 aa15.05■□□□□ -0
RPA3-202ENST00000396682 USP15Q9Y4E8 981 aaPredicted RBP15.05■□□□□ -0
RPA3-202ENST00000396682 PCDHA10Q9Y5I2 948 aa15.05■□□□□ -0
RPA3-202ENST00000396682 CCDC196A0A1B0GTZ2 297 aa15.04■□□□□ -0
RPA3-202ENST00000396682 PRPF3O43395 683 aaKnown RBP15.04■□□□□ -0
RPA3-202ENST00000396682 ZNF862O60290 1169 aa15.04■□□□□ -0
RPA3-202ENST00000396682 PSAPP07602 524 aa15.04■□□□□ -0
RPA3-202ENST00000396682 NHLH1Q02575 133 aa15.04■□□□□ -0
RPA3-202ENST00000396682 KCNC3Q14003 757 aa15.04■□□□□ -0
RPA3-202ENST00000396682 CBX2Q14781 532 aaPredicted RBP15.04■□□□□ -0
RPA3-202ENST00000396682 NTRK3Q16288 839 aa15.04■□□□□ -0
RPA3-202ENST00000396682 DUSP6Q16828 381 aa15.04■□□□□ -0
RPA3-202ENST00000396682 ODR4Q5SWX8 454 aa15.04■□□□□ -0
RPA3-202ENST00000396682 LRRC55Q6ZSA7 311 aa15.04■□□□□ -0
RPA3-202ENST00000396682 MICAL1Q8TDZ2 1067 aa15.04■□□□□ -0
RPA3-202ENST00000396682 EDAQ92838 391 aa15.04■□□□□ -0
RPA3-202ENST00000396682 PHKBQ93100 1093 aa15.04■□□□□ -0
RPA3-202ENST00000396682 ADAMTS10Q9H324 1103 aa15.04■□□□□ -0
RPA3-202ENST00000396682 ELAC1Q9H777 363 aaKnown RBP15.04■□□□□ -0
RPA3-202ENST00000396682 ATP6V0A4Q9HBG4 840 aa15.04■□□□□ -0
RPA3-202ENST00000396682 C6orf50Q9HD87 102 aa15.04■□□□□ -0
RPA3-202ENST00000396682 AAASQ9NRG9 546 aa15.04■□□□□ -0
RPA3-202ENST00000396682 ZDBF2Q9HCK1 2354 aa15.04■□□□□ -0
RPA3-202ENST00000396682 NLRP11P59045 1033 aaKnown RBP15.03■□□□□ -0
RPA3-202ENST00000396682 FGD1P98174 961 aa15.03■□□□□ -0
RPA3-202ENST00000396682 MCTP2Q6DN12 878 aa15.03■□□□□ -0
RPA3-202ENST00000396682 CENPQQ7L2Z9 268 aaPredicted RBP15.03■□□□□ -0
RPA3-202ENST00000396682 THNSL1Q8IYQ7 743 aa15.03■□□□□ -0
RPA3-202ENST00000396682 LRRC71Q8N4P6 559 aa15.03■□□□□ -0
RPA3-202ENST00000396682 CCDC12Q8WUD4 166 aaPredicted RBP15.03■□□□□ -0
RPA3-202ENST00000396682 SUSD6Q92537 303 aa15.03■□□□□ -0
RPA3-202ENST00000396682 JAKMIP1Q96N16 626 aaKnown RBP15.03■□□□□ -0
RPA3-202ENST00000396682 CASD1Q96PB1 797 aa15.03■□□□□ -0
RPA3-202ENST00000396682 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
RPA3-202ENST00000396682 CEP131Q9UPN4 1083 aa15.03■□□□□ -0
RPA3-202ENST00000396682 SNX14Q9Y5W7 946 aa15.03■□□□□ -0
RPA3-202ENST00000396682 MSH4O15457 936 aa15.02■□□□□ -0
RPA3-202ENST00000396682 MAGEB2O15479 319 aa15.02■□□□□ -0
RPA3-202ENST00000396682 LAG3P18627 525 aa15.02■□□□□ -0
RPA3-202ENST00000396682 GNA11P29992 359 aa15.02■□□□□ -0
RPA3-202ENST00000396682 HSPA4P34932 840 aa15.02■□□□□ -0
RPA3-202ENST00000396682 PBX3P40426 434 aa15.02■□□□□ -0
RPA3-202ENST00000396682 UGCGQ16739 394 aa15.02■□□□□ -0
RPA3-202ENST00000396682 EFCAB12Q6NXP0 572 aa15.02■□□□□ -0
RPA3-202ENST00000396682 FBXL16Q8N461 479 aa15.02■□□□□ -0
RPA3-202ENST00000396682 ZNF668Q96K58 619 aaPredicted RBP15.02■□□□□ -0
RPA3-202ENST00000396682 PHF7Q9BWX1 381 aaPredicted RBP15.02■□□□□ -0
RPA3-202ENST00000396682 AGXT2Q9BYV1 514 aa15.02■□□□□ -0
RPA3-202ENST00000396682 TMEM117Q9H0C3 514 aa15.02■□□□□ -0
RPA3-202ENST00000396682 KCNH6Q9H252 994 aa15.02■□□□□ -0
RPA3-202ENST00000396682 AKT3Q9Y243 479 aa15.02■□□□□ -0
RPA3-202ENST00000396682 SAMM50Q9Y512 469 aa15.02■□□□□ -0
RPA3-202ENST00000396682 HIDE1A8MVS5 230 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 WDR64B1ANS9 1081 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 OATP04181 439 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 EIF4BP23588 611 aaKnown RBP15.01□□□□□ -0.01
RPA3-202ENST00000396682 PLCB3Q01970 1234 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 PRKCEQ02156 737 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 PLPP4Q5VZY2 271 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 BLOC1S2Q6QNY1 142 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 TMEM184AQ6ZMB5 413 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 TRIM67Q6ZTA4 783 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 ECHDC2Q86YB7 292 aa15.01□□□□□ -0.01
RPA3-202ENST00000396682 MRPS27Q92552 414 aaKnown RBP15.01□□□□□ -0.01
RPA3-202ENST00000396682 GJA10Q969M2 543 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms