RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 DDX17Q92841 729 aaKnown RBP14.93□□□□□ -0.02
COL4A3-202ENST00000396578 EIF4A1P60842 406 aaKnown RBP14.93□□□□□ -0.02
COL4A3-202ENST00000396578 ERICH1Q86X53 443 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 EAF2Q96CJ1 260 aaPredicted RBP14.93□□□□□ -0.02
COL4A3-202ENST00000396578 FAM161BQ96MY7 647 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 RPF1Q9H9Y2 349 aaKnown RBP14.93□□□□□ -0.02
COL4A3-202ENST00000396578 MFAP3LO75121 409 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 MAP4K1Q92918 833 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 PLA2G4BP0C869 781 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 CCDC24Q8N4L8 307 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 TTC13Q8NBP0 860 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 ADD3Q9UEY8 706 aaKnown RBP14.93□□□□□ -0.02
COL4A3-202ENST00000396578 INSRP06213 1382 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 PI4K2BG5E9Z4 385 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 DAB1O75553 588 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 GRIN1Q05586 938 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 LINC00301Q8NCQ3 95 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 NSUN7Q8NE18 718 aaKnown RBP14.93□□□□□ -0.02
COL4A3-202ENST00000396578 USP44Q9H0E7 712 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 ANAPC7Q9UJX3 599 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 TRAF3IP3Q9Y228 551 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 hCG_2014768A0A024R1R8 64 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 CCDC195A0A1B0GUA6 201 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 M0R2C6 588 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 HAUS5O94927 633 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 GFAPP14136 432 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 SCNN1DP51172 638 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 RAD23BP54727 409 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 GYS2P54840 703 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 STAMBPL1Q96FJ0 436 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 KLHL8Q9P2G9 620 aaPredicted RBP14.92□□□□□ -0.02
COL4A3-202ENST00000396578 DCTN4Q9UJW0 460 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 EAPPQ56P03 285 aaPredicted RBP14.92□□□□□ -0.02
COL4A3-202ENST00000396578 TAGAPQ8N103 731 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 A0A1B0GW55 424 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 MEIS1O00470 390 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 DUX4L2P0CJ85 424 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 DUX4L3P0CJ86 424 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 DUX4L4P0CJ87 422 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 DUX4L5P0CJ88 424 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 DUX4L6P0CJ89 424 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 DUX4L7P0CJ90 424 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 CCNE1P24864 410 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 KRT31Q15323 416 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 ALKBH5Q6P6C2 394 aaKnown RBP14.92□□□□□ -0.02
COL4A3-202ENST00000396578 RASGRP4Q8TDF6 673 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 PAGE5Q96GU1 130 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 GCNAQ96QF7 691 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 MMTAG2Q9BU76 263 aaKnown RBP14.92□□□□□ -0.02
COL4A3-202ENST00000396578 DUX4Q9UBX2 424 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 SEMA3EO15041 775 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 ZSCAN20P17040 1043 aaPredicted RBP14.92□□□□□ -0.02
COL4A3-202ENST00000396578 CYP27A1Q02318 531 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
COL4A3-202ENST00000396578 KIAA1841Q6NSI8 718 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 CCDC17Q96LX7 622 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 PMS2P54278 862 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 ABHD10Q9NUJ1 306 aa14.92□□□□□ -0.02
COL4A3-202ENST00000396578 MIF4GDA9UHW6 222 aaKnown RBP14.91□□□□□ -0.02
COL4A3-202ENST00000396578 ATP11BQ9Y2G3 1177 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 ERVV-2B6SEH9 535 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 PIK3R2O00459 728 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 CEP55Q53EZ4 464 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 DTNBP1Q96EV8 351 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 FAM167BQ9BTA0 163 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 MAGEB5Q9BZ81 275 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 ADCK5Q3MIX3 580 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 ZBTB33Q86T24 672 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 MED21Q13503 144 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 PTK2BQ14289 1009 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 SCARA5Q6ZMJ2 495 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 BLVRAP53004 296 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 TOGARAM2Q6ZUX3 1019 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 SLC26A7Q8TE54 656 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 LRFN2Q9ULH4 789 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 ZSCAN9O15535 394 aaPredicted RBP14.91□□□□□ -0.02
COL4A3-202ENST00000396578 IL10P22301 178 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 ZMYM1Q5SVZ6 1142 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 CCDC22O60826 627 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 HADHAP40939 763 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 SLFNL1Q499Z3 407 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 TJAP1Q5JTD0 557 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 DPP9Q86TI2 863 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 GRAMD1AQ96CP6 724 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 KLC4Q9NSK0 619 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 RCOR1Q9UKL0 485 aa14.91□□□□□ -0.02
COL4A3-202ENST00000396578 GOLGA8MH3BSY2 632 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 IFT43Q96FT9 208 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 EML4Q9HC35 981 aaKnown RBP14.9□□□□□ -0.02
COL4A3-202ENST00000396578 A0A087WWV3 80 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL4A3-202ENST00000396578 AP1B1Q10567 949 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 OTUB1Q96FW1 271 aaPredicted RBP14.9□□□□□ -0.02
COL4A3-202ENST00000396578 SLFN12LQ6IEE8 588 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 NLRP14Q86W24 1093 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 SPICE1Q8N0Z3 855 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 ETNK1Q9HBU6 452 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 ADAMTS1Q9UHI8 967 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 PJA2O43164 708 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 KIF23Q02241 960 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms