RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NRBP1Q9UHY1 535 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 UBE4BO95155 1302 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 KCNA1Q09470 495 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 LAMC2Q13753 1193 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 GJC2Q5T442 439 aaPredicted RBP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 CSGALNACT2Q8N6G5 542 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 PPTC7Q8NI37 304 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 TMEM174Q8WUU8 243 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 SOCS4Q8WXH5 440 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 CEP170P1Q96L14 293 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 DHX33Q9H6R0 707 aaKnown RBP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 MRPL44Q9H9J2 332 aaKnown RBP14.06□□□□□ -0.16
TRIM39-204ENST00000396548 GPRC5CQ9NQ84 441 aa14.06□□□□□ -0.16
TRIM39-204ENST00000396548 SERPINC1P01008 464 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 EEF1GP26641 437 aaKnown RBP14.05□□□□□ -0.16
TRIM39-204ENST00000396548 RTP1P59025 263 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 CCL14Q16627 93 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 NFIL3Q16649 462 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 DUSP28Q4G0W2 176 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 FAM160B1Q5W0V3 765 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 IQSEC1Q6DN90 963 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 NTPCRQ9BSD7 190 aaKnown RBP14.05□□□□□ -0.16
TRIM39-204ENST00000396548 ZHX3Q9H4I2 956 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.05□□□□□ -0.16
TRIM39-204ENST00000396548 SEPT9Q9UHD8 586 aaPredicted RBP14.05□□□□□ -0.16
TRIM39-204ENST00000396548 TGFB1I1O43294 461 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 CBFA2T2O43439 604 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 DGAT1O75907 488 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 EDRF1Q3B7T1 1238 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 VSTM4Q8IW00 320 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 APBA2Q99767 749 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 ARHGAP39Q9C0H5 1083 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 GNEQ9Y223 722 aaKnown RBP14.05□□□□□ -0.16
TRIM39-204ENST00000396548 PPME1Q9Y570 386 aa14.05□□□□□ -0.16
TRIM39-204ENST00000396548 PRPF6O94906 941 aaKnown RBP14.04□□□□□ -0.16
TRIM39-204ENST00000396548 GH1P01241 217 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 ZC2HC1CQ53FD0 456 aaPredicted RBP14.04□□□□□ -0.16
TRIM39-204ENST00000396548 ODR4Q5SWX8 454 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 PPP4R3CPQ6ZMV5 832 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 BSNDQ8WZ55 320 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 DRC1Q96MC2 740 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 PDXKO00764 312 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 KIF20AO95235 890 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 RGS2P41220 211 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 MARSP56192 900 aaKnown RBP14.04□□□□□ -0.16
TRIM39-204ENST00000396548 LACTBP83111 547 aaPredicted RBP14.04□□□□□ -0.16
TRIM39-204ENST00000396548 SPAG1Q07617 926 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 TBX2Q13207 712 aaPredicted RBP14.04□□□□□ -0.16
TRIM39-204ENST00000396548 PLCB4Q15147 1175 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 CTAGE1Q96RT6 745 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 TEX33O43247 280 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 GCNT3O95395 438 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 CDK11BP21127 795 aaKnown RBP14.04□□□□□ -0.16
TRIM39-204ENST00000396548 GTF2BQ00403 316 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 MIIPQ5JXC2 388 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 NELFCDQ8IXH7 590 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 SPC24Q8NBT2 197 aa14.04□□□□□ -0.16
TRIM39-204ENST00000396548 XRCC5P13010 732 aaKnown RBP14.03□□□□□ -0.16
TRIM39-204ENST00000396548 YY1P25490 414 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 SLC26A2P50443 739 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 COPB1P53618 953 aaKnown RBP14.03□□□□□ -0.16
TRIM39-204ENST00000396548 SOX10P56693 466 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 TPD52L1Q16890 204 aaPredicted RBP14.03□□□□□ -0.16
TRIM39-204ENST00000396548 TRIM50Q86XT4 487 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 FAM178BQ8IXR5 827 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 SPIRE2Q8WWL2 714 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
TRIM39-204ENST00000396548 KIFAP3Q92845 792 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 CEP63Q96MT8 703 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 C16orf70Q9BSU1 422 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 C17orf75Q9HAS0 396 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 IMPACTQ9P2X3 320 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 IGKV6-21A0A0C4DH24 114 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 ARL2P36404 184 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 PRAMEF19Q5SWL8 479 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 MAEAQ7L5Y9 396 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 MCPH1Q8NEM0 835 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 ATP8B4Q8TF62 1192 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 CNOT6LQ96LI5 555 aaKnown RBP14.03□□□□□ -0.16
TRIM39-204ENST00000396548 IKZF4Q9H2S9 585 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 KCNF1Q9H3M0 494 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 ATP6V0A4Q9HBG4 840 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 TYW1Q9NV66 732 aaKnown RBP14.03□□□□□ -0.16
TRIM39-204ENST00000396548 LARSQ9P2J5 1176 aaKnown RBP14.03□□□□□ -0.16
TRIM39-204ENST00000396548 PCNTO95613 3336 aa14.03□□□□□ -0.16
TRIM39-204ENST00000396548 TNPO2O14787 897 aaKnown RBP14.02□□□□□ -0.16
TRIM39-204ENST00000396548 MAFO75444 373 aaPredicted RBP14.02□□□□□ -0.16
TRIM39-204ENST00000396548 RFC5P40937 340 aa14.02□□□□□ -0.16
TRIM39-204ENST00000396548 FKBP3Q00688 224 aaKnown RBP14.02□□□□□ -0.16
TRIM39-204ENST00000396548 EMC2Q15006 297 aa14.02□□□□□ -0.16
TRIM39-204ENST00000396548 MTERF2Q49AM1 385 aa14.02□□□□□ -0.16
TRIM39-204ENST00000396548 FILIP1Q7Z7B0 1213 aa14.02□□□□□ -0.16
TRIM39-204ENST00000396548 KSR1Q8IVT5 923 aa14.02□□□□□ -0.16
TRIM39-204ENST00000396548 TMEM161BQ8NDZ6 487 aa14.02□□□□□ -0.16
TRIM39-204ENST00000396548 FAM167AQ96KS9 214 aa14.02□□□□□ -0.16
TRIM39-204ENST00000396548 SMARCAD1Q9H4L7 1026 aa14.02□□□□□ -0.16
TRIM39-204ENST00000396548 NRBP2Q9NSY0 501 aa14.02□□□□□ -0.16
TRIM39-204ENST00000396548 NOP56O00567 594 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms