RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 EARS2Q5JPH6 523 aaKnown RBP20.64■□□□□ 0.89
FXN-203ENST00000396366 LINC01465Q8N7H1 131 aa20.64■□□□□ 0.89
FXN-203ENST00000396366 FAM167AQ96KS9 214 aa20.64■□□□□ 0.89
FXN-203ENST00000396366 ORC3Q9UBD5 711 aaPredicted RBP20.64■□□□□ 0.89
FXN-203ENST00000396366 DDX25Q9UHL0 483 aaKnown RBP20.64■□□□□ 0.89
FXN-203ENST00000396366 CEP131Q9UPN4 1083 aa20.64■□□□□ 0.89
FXN-203ENST00000396366 MRPL42Q9Y6G3 142 aaKnown RBP20.64■□□□□ 0.89
FXN-203ENST00000396366 CCDC194A0A1B0GVG4 234 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 FAM205CA6NFA0 338 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 GRM6O15303 877 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 MAGEB2O15479 319 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 NEK4P51957 841 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 NLRP11P59045 1033 aaKnown RBP20.63■□□□□ 0.89
FXN-203ENST00000396366 ANKRD1Q15327 319 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 PTPROQ16827 1216 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 PIK3AP1Q6ZUJ8 805 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 FAM228AQ86W67 206 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 NPAS4Q8IUM7 802 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 FAM177A1Q8N128 213 aaPredicted RBP20.63■□□□□ 0.89
FXN-203ENST00000396366 CLP1Q92989 425 aaKnown RBP20.63■□□□□ 0.89
FXN-203ENST00000396366 ADAM2Q99965 735 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 AKT3Q9Y243 479 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 ATG2AQ2TAZ0 1938 aa20.63■□□□□ 0.89
FXN-203ENST00000396366 KIAA1671Q9BY89 1806 aa20.62■□□□□ 0.89
FXN-203ENST00000396366 NCOR1O75376 2440 aa20.62■□□□□ 0.89
FXN-203ENST00000396366 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.62■□□□□ 0.89
FXN-203ENST00000396366 C5orf67F2Z3F1 127 aa20.62■□□□□ 0.89
FXN-203ENST00000396366 EML1O00423 815 aa20.62■□□□□ 0.89
FXN-203ENST00000396366 CSPG5O95196 566 aa20.62■□□□□ 0.89
FXN-203ENST00000396366 MOXD1Q6UVY6 613 aa20.62■□□□□ 0.89
FXN-203ENST00000396366 BANK1Q8NDB2 785 aa20.62■□□□□ 0.89
FXN-203ENST00000396366 ADAMTS10Q9H324 1103 aa20.62■□□□□ 0.89
FXN-203ENST00000396366 RGS18Q9NS28 235 aa20.62■□□□□ 0.89
FXN-203ENST00000396366 DENND3A2RUS2 1198 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 GPR182O15218 404 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 SARSP49591 514 aaKnown RBP20.61■□□□□ 0.89
FXN-203ENST00000396366 DRP2Q13474 957 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 TARBP2Q15633 366 aaKnown RBP20.61■□□□□ 0.89
FXN-203ENST00000396366 TCEAL5Q5H9L2 206 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 FAM102BQ5T8I3 360 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 NEK8Q86SG6 692 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 CMTR2Q8IYT2 770 aaKnown RBP20.61■□□□□ 0.89
FXN-203ENST00000396366 GTF3C6Q969F1 213 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 CEP89Q96ST8 783 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 UBE2ZQ9H832 354 aaPredicted RBP20.61■□□□□ 0.89
FXN-203ENST00000396366 ALG13Q9NP73 1137 aaKnown RBP20.61■□□□□ 0.89
FXN-203ENST00000396366 SEPT9Q9UHD8 586 aaPredicted RBP20.61■□□□□ 0.89
FXN-203ENST00000396366 LRFN2Q9ULH4 789 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 PCDHB7Q9Y5E2 793 aa20.61■□□□□ 0.89
FXN-203ENST00000396366 CCNT1O60563 726 aaKnown RBP20.6■□□□□ 0.89
FXN-203ENST00000396366 JAK2O60674 1132 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 RB1P06400 928 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 STAG3L1P0CL83 205 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 XBP1P17861 261 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 KCNA5P22460 613 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 FOSBP53539 338 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 NR5A1Q13285 461 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 MTERF2Q49AM1 385 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 NSUN7Q8NE18 718 aaKnown RBP20.6■□□□□ 0.89
FXN-203ENST00000396366 RDM1Q8NG50 284 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 NIFKQ9BYG3 293 aaKnown RBP20.6■□□□□ 0.89
FXN-203ENST00000396366 KCNMB3Q9NPA1 279 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 VAV3Q9UKW4 847 aa20.6■□□□□ 0.89
FXN-203ENST00000396366 DDX11L8A8MPP1 907 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 C9IYK1 514 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 FGFR4P22455 802 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 TMOD1P28289 359 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 TBC1D8BQ0IIM8 1120 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 CAMK1Q14012 370 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 DSC3Q14574 896 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 XKR3Q5GH77 459 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 PPP4R3AQ6IN85 833 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 SLC24A5Q71RS6 500 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 HAS1Q92839 578 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 MAP7D2Q96T17 732 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 C11orf84Q9BUA3 381 aaPredicted RBP20.59■□□□□ 0.89
FXN-203ENST00000396366 PLAGL2Q9UPG8 496 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 RWDD3Q9Y3V2 267 aa20.59■□□□□ 0.89
FXN-203ENST00000396366 FNDC1Q4ZHG4 1894 aaPredicted RBP20.58■□□□□ 0.89
FXN-203ENST00000396366 CSDE1O75534 798 aaKnown RBP20.58■□□□□ 0.89
FXN-203ENST00000396366 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.89
FXN-203ENST00000396366 DNAJB1P25685 340 aa20.58■□□□□ 0.89
FXN-203ENST00000396366 GPC3P51654 580 aa20.58■□□□□ 0.89
FXN-203ENST00000396366 ST3GAL1Q11201 340 aa20.58■□□□□ 0.89
FXN-203ENST00000396366 TIGD5Q53EQ6 642 aa20.58■□□□□ 0.89
FXN-203ENST00000396366 ANO5Q75V66 913 aa20.58■□□□□ 0.89
FXN-203ENST00000396366 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.58■□□□□ 0.89
FXN-203ENST00000396366 TNFRSF25Q93038 417 aa20.58■□□□□ 0.89
FXN-203ENST00000396366 NSUN3Q9H649 340 aaKnown RBP20.58■□□□□ 0.89
FXN-203ENST00000396366 HCSTQ9UBK5 93 aa20.58■□□□□ 0.89
FXN-203ENST00000396366 TBKBP1A7MCY6 615 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 ITGB1P05556 798 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 FGFR1P11362 822 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 EIF4BP23588 611 aaKnown RBP20.57■□□□□ 0.88
FXN-203ENST00000396366 KRT2P35908 639 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 FAM189BP81408 668 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 PPP2R5CQ13362 524 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 ODR4Q5SWX8 454 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 PLA2G4FQ68DD2 849 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 POTEDQ86YR6 584 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms