RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 PI4KBQ9UBF8 816 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 ARMCX3Q9UH62 379 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 ASTN2O75129 1339 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 PSME4Q14997 1843 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 ZBTB5O15062 677 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 MED24O75448 989 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 KIF4AO95239 1232 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 GCFC2P16383 781 aaKnown RBP15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 PSEN1P49768 467 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 PABPC4Q13310 644 aaKnown RBP eCLIP15.31■□□□□ 0.041e-8■■■□□ 17
CCHCR1-203ENST00000396268 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 KDM7AQ6ZMT4 941 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 SIAH1Q8IUQ4 282 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 ATP6V1G3Q96LB4 118 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 TAF1DQ9H5J8 278 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 UCHL3P15374 230 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 CLK2P49760 499 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 ERVK-9P63128 1117 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 EXOC3L4Q17RC7 722 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 ALKBH5Q6P6C2 394 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 MIGA2Q7L4E1 593 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 OGFOD1Q8N543 542 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 CCT8L2Q96SF2 557 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 SWAP70Q9UH65 585 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 TMOD1P28289 359 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 SPRED3Q2MJR0 410 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 FER1L6Q2WGJ9 1857 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 PPP1R18Q6NYC8 613 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 ZKSCAN4Q969J2 545 aaPredicted RBP15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 DDX47Q9H0S4 455 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 CNTNAP1P78357 1384 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 PPP1R37O75864 691 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 XRCC5P13010 732 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 EEF2P13639 858 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 MARSP56192 900 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 MREGQ8N565 214 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 CCDC114Q96M63 670 aa15.3■□□□□ 0.04
CCHCR1-203ENST00000396268 PLIN4Q96Q06 1357 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 AFPP02771 609 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 PSMC6P62333 389 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 IFI16Q16666 785 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 ARSHQ5FYA8 562 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 IRF2BP2Q7Z5L9 587 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 EPN3Q9H201 632 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 DHX36Q9H2U1 1008 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 NAGPAQ9UK23 515 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 CEP83Q9Y592 693 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 USP11P51784 963 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 PRR16Q569H4 304 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 HYIQ5T013 277 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 PEX26Q7Z412 305 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 NLRP14Q86W24 1093 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 SFR1Q86XK3 245 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 CCDC13Q8IYE1 715 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 JDP2Q8WYK2 163 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 N4BP2L2Q92802 583 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 KLC4Q9NSK0 619 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 GJA3Q9Y6H8 435 aa15.29■□□□□ 0.04
CCHCR1-203ENST00000396268 GCOM1H8Y6P7 765 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 KRIT1O00522 736 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 WNT10BO00744 389 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 SART1O43290 800 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 FLOT1O75955 427 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 GH2P01242 217 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 RPSAP08865 295 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 MYZAPP0CAP1 466 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 CTNNA1P35221 906 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 SNAP25P60880 206 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 EDRF1Q3B7T1 1238 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 ODF2Q5BJF6 829 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 GPATCH4Q5T3I0 446 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 CIAPIN1Q6FI81 312 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 SAMD7Q7Z3H4 446 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 UBLCP1Q8WVY7 318 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 ANO3Q9BYT9 981 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 ISCUQ9H1K1 167 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 MYH4Q9Y623 1939 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 HMGB1P1B2RPK0 211 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 PGRMC1O00264 195 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 TAL1P17542 331 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 HSD17B3P37058 310 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 MDH1P40925 334 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 CYP4A11Q02928 519 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 CATSPER3Q86XQ3 398 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 PBKQ96KB5 322 aa15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 NOC2LQ9Y3T9 749 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-203ENST00000396268 CLIC2O15247 247 aa15.27■□□□□ 0.04
CCHCR1-203ENST00000396268 MYBP10242 640 aa15.27■□□□□ 0.04
CCHCR1-203ENST00000396268 PON1P27169 355 aa15.27■□□□□ 0.04
CCHCR1-203ENST00000396268 HSPA9P38646 679 aaKnown RBP15.27■□□□□ 0.04
CCHCR1-203ENST00000396268 SLC12A3P55017 1021 aa15.27■□□□□ 0.04
CCHCR1-203ENST00000396268 PTGISQ16647 500 aa15.27■□□□□ 0.04
CCHCR1-203ENST00000396268 KNOP1Q1ED39 458 aaKnown RBP15.27■□□□□ 0.04
CCHCR1-203ENST00000396268 QRICH1Q2TAL8 776 aa15.27■□□□□ 0.04
CCHCR1-203ENST00000396268 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.04
CCHCR1-203ENST00000396268 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms