RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 PTPAQ15257 358 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 KRT31Q15323 416 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 PDCD4Q53EL6 469 aaKnown RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 TTC39AQ5SRH9 613 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 NEPROQ6NW34 567 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 SYT2Q8N9I0 419 aaPredicted RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 SUPT20HQ8NEM7 779 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 LRRC8CQ8TDW0 803 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 GFM2Q969S9 779 aaKnown RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 AGXT2Q9BYV1 514 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 ISCUQ9H1K1 167 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 FAIMQ9NVQ4 179 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 TIMM22Q9Y584 194 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 FADS3Q9Y5Q0 445 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 N4BP2Q86UW6 1770 aaPredicted RBP10.47□□□□□ -0.73
CDRT1-204ENST00000395906 MYH7BA7E2Y1 1941 aa10.47□□□□□ -0.73
CDRT1-204ENST00000395906 KIF28PB7ZC32 967 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 WNT7AO00755 349 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 ECE2O60344 883 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 ATP5HO75947 161 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 GJB6O95452 261 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 LYNP07948 512 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 PABPC4LP0CB38 370 aaKnown RBP10.46□□□□□ -0.73
CDRT1-204ENST00000395906 GM2AP17900 193 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 S100A1P23297 94 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 CXCR5P32302 372 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 MECOMQ03112 1051 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 SPAG1Q07617 926 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 R3HDM1Q15032 1099 aaKnown RBP10.46□□□□□ -0.73
CDRT1-204ENST00000395906 MEA1Q16626 185 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 INTS5Q6P9B9 1019 aaKnown RBP10.46□□□□□ -0.73
CDRT1-204ENST00000395906 WDR59Q6PJI9 974 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 MARK2Q7KZI7 788 aaKnown RBP10.46□□□□□ -0.73
CDRT1-204ENST00000395906 MIGA2Q7L4E1 593 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 CYP4X1Q8N118 509 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 UBLCP1Q8WVY7 318 aaPredicted RBP10.46□□□□□ -0.73
CDRT1-204ENST00000395906 SCG3Q8WXD2 468 aaKnown RBP10.46□□□□□ -0.73
CDRT1-204ENST00000395906 LRMDAQ9H2I8 198 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 DPH5Q9H2P9 285 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 QPCTLQ9NXS2 382 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 ARL2BPQ9Y2Y0 163 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 TTLL3Q9Y4R7 772 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 HEY1Q9Y5J3 304 aa10.46□□□□□ -0.73
CDRT1-204ENST00000395906 KANSL1LA0AUZ9 987 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 TTC26A0AVF1 554 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 CCDC162PA2VCL2 907 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 GSTT2P0CG29 244 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 GSTT2BP0CG30 244 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 MYCLP1P12525 358 aaPredicted RBP10.46□□□□□ -0.74
CDRT1-204ENST00000395906 PDIA3P30101 505 aaKnown RBP10.46□□□□□ -0.74
CDRT1-204ENST00000395906 MMP13P45452 471 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 COPB1P53618 953 aaKnown RBP10.46□□□□□ -0.74
CDRT1-204ENST00000395906 STX17P56962 302 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 SPIDRQ14159 915 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 HLTFQ14527 1009 aaKnown RBP eCLIP10.46□□□□□ -0.74
CDRT1-204ENST00000395906 TTF1Q15361 905 aaPredicted RBP10.46□□□□□ -0.74
CDRT1-204ENST00000395906 ADRM1Q16186 407 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 ZNF589Q86UQ0 364 aaPredicted RBP10.46□□□□□ -0.74
CDRT1-204ENST00000395906 LINC00116Q8NCU8 138 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 FAM13CQ8NE31 585 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 SPATA20Q8TB22 786 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 EXOC1Q9NV70 894 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 INTS9Q9NV88 658 aaKnown RBP10.46□□□□□ -0.74
CDRT1-204ENST00000395906 PTTG2Q9NZH5 202 aa10.46□□□□□ -0.74
CDRT1-204ENST00000395906 H0Y3Z8 333 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 ACADVLP49748 655 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 EIF3BP55884 814 aaKnown RBP10.45□□□□□ -0.74
CDRT1-204ENST00000395906 CCDC6Q16204 474 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 OTUD6AQ7L8S5 288 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 GDAP1Q8TB36 358 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 TMEM237Q96Q45 408 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 MAK16Q9BXY0 300 aaKnown RBP10.45□□□□□ -0.74
CDRT1-204ENST00000395906 PNMA2Q9UL42 364 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 USP20Q9Y2K6 914 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 CD2APQ9Y5K6 639 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 CAPN6Q9Y6Q1 641 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 AFPP02771 609 aaKnown RBP10.45□□□□□ -0.74
CDRT1-204ENST00000395906 MYBP10242 640 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 NAT2P11245 290 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 GALK1P51570 392 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 DMPKQ09013 629 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDRT1-204ENST00000395906 SNX30Q5VWJ9 437 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 FITM2Q8N6M3 262 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 SCAIQ8N9R8 606 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 CASP10Q92851 521 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 PRMT1Q99873 361 aaKnown RBP10.45□□□□□ -0.74
CDRT1-204ENST00000395906 SELENOSQ9BQE4 189 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 FSD1Q9BTV5 496 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 VPS16Q9H269 839 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 TIMMDC1Q9NPL8 285 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 DDX43Q9NXZ2 648 aaKnown RBP10.45□□□□□ -0.74
CDRT1-204ENST00000395906 DKK3Q9UBP4 350 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 FBXL5Q9UKA1 691 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 CAPN11Q9UMQ6 739 aa10.45□□□□□ -0.74
CDRT1-204ENST00000395906 FAM32AQ9Y421 112 aaKnown RBP10.45□□□□□ -0.74
CDRT1-204ENST00000395906 MYH14Q7Z406 1995 aaKnown RBP10.45□□□□□ -0.74
CDRT1-204ENST00000395906 PXDNLA1KZ92 1463 aa10.44□□□□□ -0.74
CDRT1-204ENST00000395906 GRID2IPA4D2P6 1211 aa10.44□□□□□ -0.74
CDRT1-204ENST00000395906 SH2B2O14492 632 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms