RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ERAP1Q9NZ08 941 aa22.59■■□□□ 1.21
VCPKMT-202ENST00000395860 CCNE1P24864 410 aa22.58■■□□□ 1.21
VCPKMT-202ENST00000395860 POLGP54098 1239 aaPredicted RBP22.58■■□□□ 1.21
VCPKMT-202ENST00000395860 PLCB4Q15147 1175 aa22.58■■□□□ 1.21
VCPKMT-202ENST00000395860 ODR4Q5SWX8 454 aa22.58■■□□□ 1.21
VCPKMT-202ENST00000395860 MCPH1Q8NEM0 835 aa22.58■■□□□ 1.21
VCPKMT-202ENST00000395860 ATP8B4Q8TF62 1192 aa22.58■■□□□ 1.21
VCPKMT-202ENST00000395860 P2RX5Q93086 422 aa22.58■■□□□ 1.21
VCPKMT-202ENST00000395860 FANCLQ9NW38 375 aa22.58■■□□□ 1.21
VCPKMT-202ENST00000395860 LARSQ9P2J5 1176 aaKnown RBP22.58■■□□□ 1.21
VCPKMT-202ENST00000395860 BICDL2A1A5D9 508 aa22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 TRIM49BA6NDI0 452 aa22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 CYBAP13498 195 aa22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 ARHGEF6Q15052 776 aa22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 DGKDQ16760 1214 aa22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 FAM178BQ8IXR5 827 aa22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 ZNF296Q8WUU4 475 aaPredicted RBP22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 LENG1Q96BZ8 264 aaPredicted RBP22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 BEGAINQ9BUH8 593 aa22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 TRPC6Q9Y210 931 aa22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 Q9Y3F1 56 aa22.58■■□□□ 1.2
VCPKMT-202ENST00000395860 GCNT3O95395 438 aa22.57■■□□□ 1.2
VCPKMT-202ENST00000395860 MAP2K1Q02750 393 aaPredicted RBP22.57■■□□□ 1.2
VCPKMT-202ENST00000395860 TARBP2Q15633 366 aaKnown RBP22.57■■□□□ 1.2
VCPKMT-202ENST00000395860 TRPV1Q8NER1 839 aa22.57■■□□□ 1.2
VCPKMT-202ENST00000395860 HSD3B7Q9H2F3 369 aa22.57■■□□□ 1.2
VCPKMT-202ENST00000395860 GPRC5CQ9NQ84 441 aa22.57■■□□□ 1.2
VCPKMT-202ENST00000395860 PDLIM7Q9NR12 457 aa22.57■■□□□ 1.2
VCPKMT-202ENST00000395860 PPME1Q9Y570 386 aa22.57■■□□□ 1.2
VCPKMT-202ENST00000395860 ZNF286BP0CG31 522 aa22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 HOXD8P13378 290 aaPredicted RBP22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 PLS3P13797 630 aa22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 RFC5P40937 340 aa22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 CASP5P51878 434 aa22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 PMS1P54277 932 aaKnown RBP22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 EMC2Q15006 297 aa22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 SCFD1Q8WVM8 642 aa22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 SLC7A3Q8WY07 619 aa22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 KIFAP3Q92845 792 aa22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 AP5M1Q9H0R1 490 aa22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 ZNF215Q9UL58 517 aaPredicted RBP22.56■■□□□ 1.2
VCPKMT-202ENST00000395860 HBP1O60381 514 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 MYBP10242 640 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 ELNP15502 786 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 NMT1P30419 496 aaKnown RBP22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 CENPPQ6IPU0 288 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 RAET1EQ8TD07 263 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 CEP89Q96ST8 783 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 C16orf70Q9BSU1 422 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 DHX33Q9H6R0 707 aaKnown RBP22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 XPNPEP1Q9NQW7 623 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 A6NJR5 290 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 AP5Z1O43299 807 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 ADCY3O60266 1144 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 CNGA1P29973 690 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 CACNB2Q08289 660 aaPredicted RBP22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 TRIM32Q13049 653 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 BRDTQ58F21 947 aaPredicted RBP22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 ANKRD40Q6AI12 368 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 STXBP4Q6ZWJ1 553 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 EPM2AIP1Q7L775 607 aaPredicted RBP22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 NELFCDQ8IXH7 590 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 FIZ1Q96SL8 496 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 SEMA6BQ9H3T3 888 aa22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 SAMSN1Q9NSI8 373 aaKnown RBP22.55■■□□□ 1.2
VCPKMT-202ENST00000395860 H3BRB1 525 aa22.54■■□□□ 1.2
VCPKMT-202ENST00000395860 CDK11BP21127 795 aaKnown RBP22.54■■□□□ 1.2
VCPKMT-202ENST00000395860 CPT1AP50416 773 aa22.54■■□□□ 1.2
VCPKMT-202ENST00000395860 HSP90AA4PQ58FG1 418 aa22.54■■□□□ 1.2
VCPKMT-202ENST00000395860 TTI2Q6NXR4 508 aa22.54■■□□□ 1.2
VCPKMT-202ENST00000395860 ZNF720Q7Z2F6 126 aa22.54■■□□□ 1.2
VCPKMT-202ENST00000395860 TSG101Q99816 390 aa22.54■■□□□ 1.2
VCPKMT-202ENST00000395860 RNPEPQ9H4A4 650 aa22.54■■□□□ 1.2
VCPKMT-202ENST00000395860 TUT1Q9H6E5 874 aaKnown RBP22.54■■□□□ 1.2
VCPKMT-202ENST00000395860 K7ENM7 598 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 EIF3DO15371 548 aaKnown RBP eCLIP22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 DUSP11O75319 330 aaKnown RBP22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 PRPF6O94906 941 aaKnown RBP22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 MAPTP10636 758 aaKnown RBP22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 PEX3P56589 373 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 SOX10P56693 466 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 TBC1D8BQ0IIM8 1120 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 SARM1Q6SZW1 724 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 TRIM5Q9C035 493 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 POLR3FQ9H1D9 316 aaPredicted RBP22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 C17orf75Q9HAS0 396 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 TSKSQ9UJT2 592 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 KAT6AQ92794 2004 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 MAFO75444 373 aaPredicted RBP22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 ADCY5O95622 1261 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 ATP1A3P13637 1013 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 C1QTNF8P60827 252 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 LRRC63Q05C16 580 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 DMP1Q13316 513 aaPredicted RBP22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 BMT2Q1RMZ1 405 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 EXOC8Q8IYI6 725 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 ZNF507Q8TCN5 953 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 PCDHB13Q9Y5F0 798 aa22.53■■□□□ 1.2
VCPKMT-202ENST00000395860 UBE4BO95155 1302 aa22.52■■□□□ 1.2
VCPKMT-202ENST00000395860 SEPT4O43236 478 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms