RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 NUCKS1Q9H1E3 243 aaKnown RBP15.55■□□□□ 0.08
CLIP2-203ENST00000395060 TAS2R14Q9NYV8 317 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 AIPL1Q9NZN9 384 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 USP21Q9UK80 565 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 TRIM33Q9UPN9 1127 aa15.55■□□□□ 0.08
CLIP2-203ENST00000395060 DR1Q01658 176 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 PALB2Q86YC2 1186 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 GDAP1Q8TB36 358 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 SLC35G2Q8TBE7 412 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 KCNV2Q8TDN2 545 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 SPZ1Q9BXG8 430 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 AMFRQ9UKV5 643 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 AGAP1Q9UPQ3 857 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 ATXN2Q99700 1313 aaKnown RBP15.54■□□□□ 0.08
CLIP2-203ENST00000395060 CCT8L1PA6NM43 557 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 CREB1P16220 341 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 DENND2CQ68D51 928 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 ACTRT1Q8TDG2 376 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 MED24O75448 989 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 BAG3O95817 575 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 KCNJ1P48048 391 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 MARCKSL1P49006 195 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 FXR2P51116 673 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLIP2-203ENST00000395060 MTMR3Q13615 1198 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 ZNF746Q6NUN9 644 aaPredicted RBP15.54■□□□□ 0.08
CLIP2-203ENST00000395060 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
CLIP2-203ENST00000395060 FAM196AQ6ZSG2 479 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 PROM2Q8N271 834 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 RNF25Q96BH1 459 aaPredicted RBP15.54■□□□□ 0.08
CLIP2-203ENST00000395060 ARHGEF26Q96DR7 871 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 PAGR1Q9BTK6 254 aa15.54■□□□□ 0.08
CLIP2-203ENST00000395060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.54■□□□□ 0.084e-7■■□□□ 12.2
CLIP2-203ENST00000395060 GCNT3O95395 438 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 AFPP02771 609 aaKnown RBP15.53■□□□□ 0.08
CLIP2-203ENST00000395060 CYP11B2P19099 503 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 DCAF12L1Q5VU92 463 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 NAIF1Q69YI7 327 aaPredicted RBP15.53■□□□□ 0.08
CLIP2-203ENST00000395060 SEPT14Q6ZU15 432 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 NT5DC3Q86UY8 548 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 CPNE8Q86YQ8 564 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 ANKS4BQ8N8V4 417 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 LBHD1Q9BQE6 289 aaPredicted RBP15.53■□□□□ 0.08
CLIP2-203ENST00000395060 NYXQ9GZU5 481 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 KCTD10Q9H3F6 313 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 SAMD15Q9P1V8 674 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 DAAM1Q9Y4D1 1078 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 PMS2P54278 862 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 TNIP1Q15025 636 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 DPP8Q6V1X1 898 aaPredicted RBP15.53■□□□□ 0.08
CLIP2-203ENST00000395060 SPICE1Q8N0Z3 855 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 FAM167BQ9BTA0 163 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 MYH1P12882 1939 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 MYH4Q9Y623 1939 aa15.53■□□□□ 0.08
CLIP2-203ENST00000395060 MYH7BA7E2Y1 1941 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 USP17L10C9JJH3 530 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 ATMINO43313 823 aaPredicted RBP15.52■□□□□ 0.08
CLIP2-203ENST00000395060 PPP1R11O60927 126 aaPredicted RBP15.52■□□□□ 0.08
CLIP2-203ENST00000395060 PLCB4Q15147 1175 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 TBC1D10BQ4KMP7 808 aaPredicted RBP15.52■□□□□ 0.08
CLIP2-203ENST00000395060 ATP8B4Q8TF62 1192 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 ELMO3Q96BJ8 720 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 POP1Q99575 1024 aaKnown RBP15.52■□□□□ 0.08
CLIP2-203ENST00000395060 EDEM3Q9BZQ6 932 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 KCNK9Q9NPC2 374 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 EVI5O60447 810 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 UBOX5O94941 541 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 ACSL3O95573 720 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 TRIM49P0CI25 452 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 TRIM49CP0CI26 452 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 IFI16Q16666 785 aaKnown RBP15.52■□□□□ 0.08
CLIP2-203ENST00000395060 TMEM119Q4V9L6 283 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 PRR16Q569H4 304 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 ARSHQ5FYA8 562 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 ERMARDQ5T6L9 678 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 SYN2Q92777 582 aaPredicted RBP15.52■□□□□ 0.08
CLIP2-203ENST00000395060 FAM129AQ9BZQ8 928 aa15.52■□□□□ 0.08
CLIP2-203ENST00000395060 GCFC2P16383 781 aaKnown RBP15.52■□□□□ 0.07
CLIP2-203ENST00000395060 VPS41P49754 854 aa15.52■□□□□ 0.07
CLIP2-203ENST00000395060 PSMD2Q13200 908 aa15.52■□□□□ 0.07
CLIP2-203ENST00000395060 LONRF1Q17RB8 773 aa15.52■□□□□ 0.07
CLIP2-203ENST00000395060 VPS36Q86VN1 386 aa15.52■□□□□ 0.07
CLIP2-203ENST00000395060 LNX1Q8TBB1 728 aaPredicted RBP15.52■□□□□ 0.07
CLIP2-203ENST00000395060 ALG3Q92685 438 aa15.52■□□□□ 0.07
CLIP2-203ENST00000395060 CUL5Q93034 780 aa15.52■□□□□ 0.07
CLIP2-203ENST00000395060 THAP2Q9H0W7 228 aa15.52■□□□□ 0.07
CLIP2-203ENST00000395060 A1CFQ9NQ94 594 aaKnown RBP15.52■□□□□ 0.07
CLIP2-203ENST00000395060 FGFR1OP2Q9NVK5 253 aa15.52■□□□□ 0.07
CLIP2-203ENST00000395060 TBK1Q9UHD2 729 aa15.52■□□□□ 0.07
CLIP2-203ENST00000395060 DIAPH2O60879 1101 aa15.51■□□□□ 0.07
CLIP2-203ENST00000395060 ANP32DO95626 131 aa15.51■□□□□ 0.07
CLIP2-203ENST00000395060 COG2Q14746 738 aa15.51■□□□□ 0.07
CLIP2-203ENST00000395060 TRIP13Q15645 432 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-203ENST00000395060 ZC2HC1CQ53FD0 456 aaPredicted RBP15.51■□□□□ 0.07
CLIP2-203ENST00000395060 WLSQ5T9L3 541 aa15.51■□□□□ 0.07
CLIP2-203ENST00000395060 AGBL2Q5U5Z8 902 aa15.51■□□□□ 0.07
CLIP2-203ENST00000395060 EMC10Q5UCC4 262 aa15.51■□□□□ 0.07
CLIP2-203ENST00000395060 NEK9Q8TD19 979 aa15.51■□□□□ 0.07
CLIP2-203ENST00000395060 PIGOQ8TEQ8 1089 aa15.51■□□□□ 0.07
CLIP2-203ENST00000395060 AGAP11Q8TF27 550 aa15.51■□□□□ 0.07
CLIP2-203ENST00000395060 ADAM33Q9BZ11 813 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms