RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CXXC1Q9P0U4 656 aaPredicted RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 KIAA1024Q9UPX6 916 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 TRIOBPQ9H2D6 2365 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 M0QZ92 97 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 PARNO95453 639 aaKnown RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 PFKMP08237 780 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 TMOD1P28289 359 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 NASPP49321 788 aaPredicted RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 RARRES1P49788 294 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 IER5Q5VY09 327 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 NME8Q8N427 588 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 CHAMP1Q96JM3 812 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 CCDC43Q96MW1 224 aaKnown RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 CLIC6Q96NY7 704 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 MAP7D2Q96T17 732 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 CELF4Q9BZC1 486 aaKnown RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 DHX33Q9H6R0 707 aaKnown RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 ANKEF1Q9NU02 776 aa22.23■■□□□ 1.15
SNCA-203ENST00000394986 DDX19AQ9NUU7 478 aaKnown RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 FBXO2Q9UK22 296 aaPredicted RBP22.23■■□□□ 1.15
SNCA-203ENST00000394986 RPLP2P05387 115 aaKnown RBP22.22■■□□□ 1.15
SNCA-203ENST00000394986 LPIN1Q14693 890 aa22.22■■□□□ 1.15
SNCA-203ENST00000394986 EMC2Q15006 297 aa22.22■■□□□ 1.15
SNCA-203ENST00000394986 SLC39A14Q15043 492 aa22.22■■□□□ 1.15
SNCA-203ENST00000394986 HABP4Q5JVS0 413 aaKnown RBP22.22■■□□□ 1.15
SNCA-203ENST00000394986 FBXO47Q5MNV8 452 aa22.22■■□□□ 1.15
SNCA-203ENST00000394986 DBF4BQ8NFT6 615 aa22.22■■□□□ 1.15
SNCA-203ENST00000394986 SLC7A3Q8WY07 619 aa22.22■■□□□ 1.15
SNCA-203ENST00000394986 ZNF396Q96N95 335 aaPredicted RBP22.22■■□□□ 1.15
SNCA-203ENST00000394986 NACC1Q96RE7 527 aa22.22■■□□□ 1.15
SNCA-203ENST00000394986 PLIN2Q99541 437 aa22.22■■□□□ 1.15
SNCA-203ENST00000394986 A0A1W2PPC1 479 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 ZBBXA8MT70 800 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 USO1O60763 962 aaKnown RBP22.21■■□□□ 1.15
SNCA-203ENST00000394986 GPR32O75388 356 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 RFC5P40937 340 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 NLRP11P59045 1033 aaKnown RBP22.21■■□□□ 1.15
SNCA-203ENST00000394986 STK38Q15208 465 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 SPECC1Q5M775 1068 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 CNKSR3Q6P9H4 555 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 KCNK18Q7Z418 384 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 TMEM40Q8WWA1 233 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 HERVK_113Q902F9 699 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 TMEM143Q96AN5 459 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 PNMA5Q96PV4 448 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 OSMRQ99650 979 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 CSRNP2Q9H175 543 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 XPNPEP1Q9NQW7 623 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 STK24Q9Y6E0 443 aa22.21■■□□□ 1.15
SNCA-203ENST00000394986 SIP14410 1827 aa22.2■■□□□ 1.14
SNCA-203ENST00000394986 E9PMD0 336 aa22.2■■□□□ 1.14
SNCA-203ENST00000394986 DNM1Q05193 864 aaKnown RBP22.2■■□□□ 1.14
SNCA-203ENST00000394986 GRB10Q13322 594 aa22.2■■□□□ 1.14
SNCA-203ENST00000394986 PLEKHG4Q58EX7 1191 aa22.2■■□□□ 1.14
SNCA-203ENST00000394986 RASIP1Q5U651 963 aa22.2■■□□□ 1.14
SNCA-203ENST00000394986 CABP7Q86V35 215 aa22.2■■□□□ 1.14
SNCA-203ENST00000394986 LINC00301Q8NCQ3 95 aa22.2■■□□□ 1.14
SNCA-203ENST00000394986 IFIH1Q9BYX4 1025 aaKnown RBP22.2■■□□□ 1.14
SNCA-203ENST00000394986 AGO3Q9H9G7 860 aaKnown RBP22.2■■□□□ 1.14
SNCA-203ENST00000394986 SUCLA2Q9P2R7 463 aaPredicted RBP22.2■■□□□ 1.14
SNCA-203ENST00000394986 DBR1Q9UK59 544 aaKnown RBP22.2■■□□□ 1.14
SNCA-203ENST00000394986 PPME1Q9Y570 386 aa22.2■■□□□ 1.14
SNCA-203ENST00000394986 SRPRBQ9Y5M8 271 aaKnown RBP22.2■■□□□ 1.14
SNCA-203ENST00000394986 TET1Q8NFU7 2136 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 XRCC6P12956 609 aaKnown RBP eCLIP22.19■■□□□ 1.14
SNCA-203ENST00000394986 MUTP22033 750 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 CD52P31358 61 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 LONP1P36776 959 aaKnown RBP22.19■■□□□ 1.14
SNCA-203ENST00000394986 GPC3P51654 580 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 FAM109BQ6ICB4 259 aaPredicted RBP22.19■■□□□ 1.14
SNCA-203ENST00000394986 USP49Q70CQ1 688 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 KSR1Q8IVT5 923 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 AK8Q96MA6 479 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 MTRQ99707 1265 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 ADAMTS10Q9H324 1103 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 KDM3AQ9Y4C1 1321 aa22.19■■□□□ 1.14
SNCA-203ENST00000394986 LAMA3Q16787 3333 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 ACTN1P12814 892 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 DDIT3P35638 169 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 ANP32AP39687 249 aaKnown RBP22.18■■□□□ 1.14
SNCA-203ENST00000394986 DNM2P50570 870 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 TSHZ1Q6ZSZ6 1077 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 MAEAQ7L5Y9 396 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 RHPN2Q8IUC4 686 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 SEPT8Q92599 483 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 SCLT1Q96NL6 688 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 JPH2Q9BR39 696 aaPredicted RBP22.18■■□□□ 1.14
SNCA-203ENST00000394986 BHMT2Q9H2M3 363 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 ATP6V0A4Q9HBG4 840 aa22.18■■□□□ 1.14
SNCA-203ENST00000394986 ARID2Q68CP9 1835 aa22.17■■□□□ 1.14
SNCA-203ENST00000394986 ARHGEF35A5YM69 484 aa22.17■■□□□ 1.14
SNCA-203ENST00000394986 SOX1O00570 391 aaPredicted RBP22.17■■□□□ 1.14
SNCA-203ENST00000394986 SPTLC2O15270 562 aa22.17■■□□□ 1.14
SNCA-203ENST00000394986 DGAT1O75907 488 aa22.17■■□□□ 1.14
SNCA-203ENST00000394986 UBA7P41226 1012 aa22.17■■□□□ 1.14
SNCA-203ENST00000394986 KARSQ15046 597 aaKnown RBP22.17■■□□□ 1.14
SNCA-203ENST00000394986 HYIQ5T013 277 aa22.17■■□□□ 1.14
SNCA-203ENST00000394986 LRRC15Q8TF66 581 aa22.17■■□□□ 1.14
SNCA-203ENST00000394986 NLRP7Q8WX94 980 aa22.17■■□□□ 1.14
SNCA-203ENST00000394986 EPSTI1Q96J88 318 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms