RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CRYBB1P53674 252 aaPredicted RBP24■■□□□ 1.43
TRAF4-203ENST00000394925 APOBRQ0VD83 1088 aa24■■□□□ 1.43
TRAF4-203ENST00000394925 METTL13Q8N6R0 699 aa24■■□□□ 1.43
TRAF4-203ENST00000394925 ZNF713Q8N859 430 aaPredicted RBP24■■□□□ 1.43
TRAF4-203ENST00000394925 GLT8D2Q9H1C3 349 aa24■■□□□ 1.43
TRAF4-203ENST00000394925 CWH43Q9H720 699 aa24■■□□□ 1.43
TRAF4-203ENST00000394925 TMEM161AQ9NX61 479 aa24■■□□□ 1.43
TRAF4-203ENST00000394925 FSD2A1L4K1 749 aa23.99■■□□□ 1.43
TRAF4-203ENST00000394925 IPO5O00410 1097 aaKnown RBP23.99■■□□□ 1.43
TRAF4-203ENST00000394925 FSCN2O14926 492 aa23.99■■□□□ 1.43
TRAF4-203ENST00000394925 C22orf31O95567 290 aa23.99■■□□□ 1.43
TRAF4-203ENST00000394925 ATF7P17544 494 aaPredicted RBP23.99■■□□□ 1.43
TRAF4-203ENST00000394925 FAM189BP81408 668 aa23.99■■□□□ 1.43
TRAF4-203ENST00000394925 PKN1Q16512 942 aa23.99■■□□□ 1.43
TRAF4-203ENST00000394925 PLPP4Q5VZY2 271 aa23.99■■□□□ 1.43
TRAF4-203ENST00000394925 PDE12Q6L8Q7 609 aaKnown RBP23.99■■□□□ 1.43
TRAF4-203ENST00000394925 SUSD6Q92537 303 aa23.99■■□□□ 1.43
TRAF4-203ENST00000394925 IGLV3-22A0A075B6J6 115 aa23.98■■□□□ 1.43
TRAF4-203ENST00000394925 GOLGA8AA7E2F4 631 aa23.98■■□□□ 1.43
TRAF4-203ENST00000394925 GOLGA8BA8MQT2 603 aa23.98■■□□□ 1.43
TRAF4-203ENST00000394925 LAG3P18627 525 aa23.98■■□□□ 1.43
TRAF4-203ENST00000394925 PTPN5P54829 565 aa23.98■■□□□ 1.43
TRAF4-203ENST00000394925 EXOSC10Q01780 885 aaKnown RBP23.98■■□□□ 1.43
TRAF4-203ENST00000394925 RNF20Q5VTR2 975 aa23.98■■□□□ 1.43
TRAF4-203ENST00000394925 FBXL6Q8N531 539 aa23.98■■□□□ 1.43
TRAF4-203ENST00000394925 ZNF577Q9BSK1 485 aa23.98■■□□□ 1.43
TRAF4-203ENST00000394925 ELAC1Q9H777 363 aaKnown RBP23.98■■□□□ 1.43
TRAF4-203ENST00000394925 GPR32O75388 356 aa23.97■■□□□ 1.43
TRAF4-203ENST00000394925 SRGAP2BP0DMP2 458 aa23.97■■□□□ 1.43
TRAF4-203ENST00000394925 TECP42680 631 aa23.97■■□□□ 1.43
TRAF4-203ENST00000394925 SIGLEC14Q08ET2 396 aa23.97■■□□□ 1.43
TRAF4-203ENST00000394925 DSC3Q14574 896 aa23.97■■□□□ 1.43
TRAF4-203ENST00000394925 BBXQ8WY36 941 aaPredicted RBP23.97■■□□□ 1.43
TRAF4-203ENST00000394925 MRPS27Q92552 414 aaKnown RBP23.97■■□□□ 1.43
TRAF4-203ENST00000394925 APOL5Q9BWW9 433 aa23.97■■□□□ 1.43
TRAF4-203ENST00000394925 FAM217BQ9NTX9 383 aaPredicted RBP23.97■■□□□ 1.43
TRAF4-203ENST00000394925 PUF60Q9UHX1 559 aaKnown RBP23.97■■□□□ 1.43
TRAF4-203ENST00000394925 LZTS1Q9Y250 596 aa23.97■■□□□ 1.43
TRAF4-203ENST00000394925 MAFBQ9Y5Q3 323 aaPredicted RBP23.97■■□□□ 1.43
TRAF4-203ENST00000394925 KLF18A0A0U1RQI7 1052 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 CYP3A4P08684 503 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 CDC27P30260 824 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 PLCB3Q01970 1234 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 LLGL2Q6P1M3 1020 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 LRRC55Q6ZSA7 311 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 DHX32Q7L7V1 743 aaKnown RBP23.96■■□□□ 1.43
TRAF4-203ENST00000394925 PRRX2Q99811 253 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 TCF25Q9BQ70 676 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 TMEM117Q9H0C3 514 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 S1PR5Q9H228 398 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 ENTPD7Q9NQZ7 604 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 TBC1D22BQ9NU19 505 aa23.96■■□□□ 1.43
TRAF4-203ENST00000394925 NAP1L2Q9ULW6 460 aaPredicted RBP23.96■■□□□ 1.43
TRAF4-203ENST00000394925 CLCN3P51790 818 aa23.95■■□□□ 1.42
TRAF4-203ENST00000394925 KCNC3Q14003 757 aa23.95■■□□□ 1.42
TRAF4-203ENST00000394925 ZNF746Q6NUN9 644 aaPredicted RBP23.95■■□□□ 1.42
TRAF4-203ENST00000394925 ANKRD54Q6NXT1 300 aa23.95■■□□□ 1.42
TRAF4-203ENST00000394925 TMEM184AQ6ZMB5 413 aa23.95■■□□□ 1.42
TRAF4-203ENST00000394925 CRYGNQ8WXF5 182 aa23.95■■□□□ 1.42
TRAF4-203ENST00000394925 CASD1Q96PB1 797 aa23.95■■□□□ 1.42
TRAF4-203ENST00000394925 TCEAL9Q9UHQ7 104 aa23.95■■□□□ 1.42
TRAF4-203ENST00000394925 KMT2EQ8IZD2 1858 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 USP34Q70CQ2 3546 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 HIDE1A8MVS5 230 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 ADAMTS3O15072 1205 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 PSAPP07602 524 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 SP100P23497 879 aaPredicted RBP23.94■■□□□ 1.42
TRAF4-203ENST00000394925 PBX3P40426 434 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 NLRP11P59045 1033 aaKnown RBP23.94■■□□□ 1.42
TRAF4-203ENST00000394925 TCF15Q12870 199 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 SYCE2Q6PIF2 218 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 KCNT2Q6UVM3 1135 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 ASIC4Q96FT7 647 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 RNF19AQ9NV58 838 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 GABBR1Q9UBS5 961 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 CEP131Q9UPN4 1083 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 AKT3Q9Y243 479 aa23.94■■□□□ 1.42
TRAF4-203ENST00000394925 CACNA1HO95180 2353 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 HOXA2O43364 376 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 ZSCAN20P17040 1043 aaPredicted RBP23.93■■□□□ 1.42
TRAF4-203ENST00000394925 SETQ01105 290 aaPredicted RBP23.93■■□□□ 1.42
TRAF4-203ENST00000394925 PTPN21Q16825 1174 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 PFKFB3Q16875 520 aaPredicted RBP23.93■■□□□ 1.42
TRAF4-203ENST00000394925 ADCK5Q3MIX3 580 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 EFCAB12Q6NXP0 572 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 SMAP1Q8IYB5 467 aaPredicted RBP23.93■■□□□ 1.42
TRAF4-203ENST00000394925 RASEFQ8IZ41 740 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 ABI1Q8IZP0 508 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 RASGRP4Q8TDF6 673 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 ZNF558Q96NG5 402 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 NGRNQ9NPE2 291 aaKnown RBP23.93■■□□□ 1.42
TRAF4-203ENST00000394925 SAMM50Q9Y512 469 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 PCDHA10Q9Y5I2 948 aa23.93■■□□□ 1.42
TRAF4-203ENST00000394925 WDR81Q562E7 1941 aa23.92■■□□□ 1.42
TRAF4-203ENST00000394925 MAGEB2O15479 319 aa23.92■■□□□ 1.42
TRAF4-203ENST00000394925 ADD1P35611 737 aaKnown RBP23.92■■□□□ 1.42
TRAF4-203ENST00000394925 VCPP55072 806 aaKnown RBP23.92■■□□□ 1.42
TRAF4-203ENST00000394925 KRT17Q04695 432 aa23.92■■□□□ 1.42
TRAF4-203ENST00000394925 TMC7Q7Z402 723 aa23.92■■□□□ 1.42
TRAF4-203ENST00000394925 ZBTB33Q86T24 672 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms