RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 AP1M1Q9BXS5 423 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 CPVLQ9H3G5 476 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 GINM1Q9NU53 330 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 POTEMA6NI47 508 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 CHEK2O96017 543 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SLCO1A2P46721 670 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 PHEXP78562 749 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 DR1Q01658 176 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 NSUN2Q08J23 767 aaKnown RBP eCLIP11.14□□□□□ -0.633e-9■■■■■ 39.7
COL4A6-203ENST00000394872 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 CELF1Q92879 486 aaKnown RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 CEP95Q96GE4 821 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SLC13A4Q9UKG4 626 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 OVOS2A0A0G2JMS6 1433 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 OVOS2A0A0J9YW53 1432 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 OVOS2Q6IE36 1432 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 EXOC1LA0A1B0GW35 172 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 NMT2O60551 498 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 TJP3O95049 919 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 RWDD2BP57060 319 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SLMAPQ14BN4 828 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 KIAA1755Q5JYT7 1200 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 UNC13DQ70J99 1090 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SFR1Q86XK3 245 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 TBC1D10CQ8IV04 446 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 PYROXD1Q8WU10 500 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 LARGE1O95461 756 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 MX2P20592 715 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 DHX9Q08211 1270 aaKnown RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SUDS3Q9H7L9 328 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 DNAJC12Q9UKB3 198 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 NEMP1O14524 444 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 HSPA8P11142 646 aaKnown RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 PRPF38AQ8NAV1 312 aaKnown RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 C2orf40Q9H1Z8 148 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 MRPL46Q9H2W6 279 aaKnown RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 KLHL8Q9P2G9 620 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 GABBR1Q9UBS5 961 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SLFNL1Q499Z3 407 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 LRRC31Q6UY01 552 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 CENPUQ71F23 418 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SCYL3Q8IZE3 742 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SLC44A5Q8NCS7 719 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 FSD1LQ9BXM9 530 aa11.14□□□□□ -0.63
COL4A6-203ENST00000394872 SUCLA2Q9P2R7 463 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 G3BP2Q9UN86 482 aaKnown RBP11.14□□□□□ -0.63
COL4A6-203ENST00000394872 WDR91A4D1P6 747 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 PPFIA2O75334 1257 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 PPP1R18Q6NYC8 613 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 RSBN1LQ6PCB5 846 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 SRRM1Q8IYB3 904 aaKnown RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 RAD54LQ92698 747 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 ZNF668Q96K58 619 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 TMEM260Q9NX78 707 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 ADAM22Q9P0K1 906 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 MID2Q9UJV3 735 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 MAGI3Q5TCQ9 1506 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 SNAP23O00161 211 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 ZNF500O60304 480 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 SKIV2LQ15477 1246 aaKnown RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 CYB5R4Q7L1T6 521 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 KLC2Q9H0B6 622 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 ASNSD1Q9NWL6 643 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 NDUFA10O95299 355 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 NCF2P19878 526 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 DRP2Q13474 957 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 ANGPTL8Q6UXH0 198 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 ACAD9Q9H845 621 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 SEC31AO94979 1220 aaKnown RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 SFNP31947 248 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 RHOT2Q8IXI1 618 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 GCOM2Q9BZD3 368 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 RNF14Q9UBS8 474 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 UBE4BO95155 1302 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 IQANK1A0A1B0GTG1 560 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 SLC8A1P32418 973 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 NNMTP40261 264 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 CCT5P48643 541 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 LIG3P49916 1009 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 ART3Q13508 389 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 RESP18Q5W5W9 173 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 XXYLT1Q8NBI6 393 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 POLR3FQ9H1D9 316 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 PRDM5Q9NQX1 630 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-203ENST00000394872 ANAPC7Q9UJX3 599 aa11.13□□□□□ -0.63
COL4A6-203ENST00000394872 CREB3O43889 395 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 NR3C1P04150 777 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 TAC1P20366 129 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 GCLMP48507 274 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 KRT31Q15323 416 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 TMEM270Q6UE05 265 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 TOGARAM2Q6ZUX3 1019 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 PPP1R9AQ9ULJ8 1098 aa11.12□□□□□ -0.63
COL4A6-203ENST00000394872 PAPOLAP51003 745 aaKnown RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 FOXD4Q12950 439 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-203ENST00000394872 NECTIN1Q15223 517 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms