RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 CATSPER4Q7RTX7 472 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 MYRIPQ8NFW9 859 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 BLZF1Q9H2G9 400 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 SMARCAD1Q9H4L7 1026 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 SLAIN2Q9P270 581 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 TJP2Q9UDY2 1190 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 C5orf58C9J3I9 102 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 NCF2P19878 526 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 PDCLQ13371 301 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 CEP55Q53EZ4 464 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 TWF2Q6IBS0 349 aaKnown RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 GRAMD4Q6IC98 578 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 TRIM72Q6ZMU5 477 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 DBNDD2Q9BQY9 259 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 CDC42BPGQ6DT37 1551 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 MYBL1P10243 752 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 AP1B1Q10567 949 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 OOSP2Q86WS3 158 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 ENAHQ8N8S7 591 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-205ENST00000394768 NEK9Q8TD19 979 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 KATNAL1Q9BW62 490 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 SH3GLB2Q9NR46 395 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 BLOC1S6Q9UL45 172 aa7.94□□□□□ -1.14
SYNE2-205ENST00000394768 PCYT1AP49585 367 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PNOCQ13519 176 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 USP13Q92995 863 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 CBX8Q9HC52 389 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 TBC1D22BQ9NU19 505 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 USP17L3A6NCW0 530 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 USP17L4A6NCW7 530 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ZBBXA8MT70 800 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 GUCY2DQ02846 1103 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 USP17L1Q7RTZ2 530 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 TACO1Q9BSH4 297 aaKnown RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PCCAP05165 728 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ZBTB41Q5SVQ8 909 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 STKLD1Q8NE28 680 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 AFG1LQ8WV93 481 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 DNAJC7Q99615 494 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ZNF556Q9HAH1 456 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 TNPO2O14787 897 aaKnown RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ESRRAP11474 423 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 KCNA1Q09470 495 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 SYDE2Q5VT97 1194 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 BCAS4Q8TDM0 211 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 FAM32AQ9Y421 112 aaKnown RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 NPC1L1Q9UHC9 1359 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PSMD3O43242 534 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 CDC25BP30305 580 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 RASGRF1Q13972 1273 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 MAPK6Q16659 721 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 EFHC2Q5JST6 749 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PPP1R18Q6NYC8 613 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 MORC4Q8TE76 937 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 KLHL29Q96CT2 875 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 EGFL8Q99944 293 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 VPS9D1Q9Y2B5 631 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PI4K2BG5E9Z4 385 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PPP6R2O75170 966 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 TOMM70O94826 608 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 SERPING1P05155 500 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 HSD17B4P51659 736 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 IRAK1BP1Q5VVH5 260 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ZNF467Q7Z7K2 595 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PIP4K2CQ8TBX8 421 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 MYOM2P54296 1465 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 KIAA0556O60303 1618 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 DNMT1P26358 1616 aaKnown RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 CCDC188H7C350 402 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 EIF2S1P05198 315 aaKnown RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 RPLP2P05387 115 aaKnown RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 SPARCL1Q14515 664 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ZSCAN26Q16670 478 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 SYTL3Q4VX76 610 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 THEMIS2Q5TEJ8 643 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PROM2Q8N271 834 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 MAML1Q92585 1016 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 CLDN3O15551 220 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 SCP2P22307 547 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 JAK1P23458 1154 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 NCALDP61601 193 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 SNX30Q5VWJ9 437 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ENOSF1Q7L5Y1 443 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 DCAF4Q8WV16 495 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 CEP95Q96GE4 821 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 NMRK1Q9NWW6 199 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PRG3Q9Y2Y8 225 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ANKARQ7Z5J8 1434 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 MAP3K19Q56UN5 1328 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 NEURL1BA8MQ27 555 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 FAM47E-STBD1D6RA91 191 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 BUB1O43683 1085 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 GUCA1CO95843 209 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 FAM107AO95990 144 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 IMPDH2P12268 514 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 IL6STP40189 918 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 BCAMP50895 628 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 MTFR1Q15390 333 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ARL6IP4Q66PJ3 421 aaKnown RBP7.93□□□□□ -1.14
SYNE2-205ENST00000394768 ARL8AQ96BM9 186 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms