RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 GJC1P36383 396 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 MAGEA9P43362 315 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 EDRF1Q3B7T1 1238 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 CRY2Q49AN0 593 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 CPLX4Q7Z7G2 160 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 TAF1DQ9H5J8 278 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-203ENST00000394419 QTRT2Q9H974 415 aaKnown RBP11.46□□□□□ -0.57
ACTN1-203ENST00000394419 PRR12Q9ULL5 1215 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 A0A1B0GUL6 1792 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 AFF2P51816 1311 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 IRS2Q9Y4H2 1338 aa11.46□□□□□ -0.57
ACTN1-203ENST00000394419 POLRMTO00411 1230 aaKnown RBP11.46□□□□□ -0.58
ACTN1-203ENST00000394419 PDXKO00764 312 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 EIF3HO15372 352 aaKnown RBP eCLIP11.46□□□□□ -0.58
ACTN1-203ENST00000394419 SPOPO43791 374 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 FERP16591 822 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 GCLMP48507 274 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 MYL7Q01449 175 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 RINT1Q6NUQ1 792 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 OGFOD1Q8N543 542 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 FAM20AQ96MK3 541 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 FBXO28Q9NVF7 368 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 FBXL5Q9UKA1 691 aa11.46□□□□□ -0.58
ACTN1-203ENST00000394419 H0YIN7 160 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 HGSO14964 777 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-203ENST00000394419 TMOD1P28289 359 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 TNIP1Q15025 636 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 SYCE1Q8N0S2 351 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 DNAJC18Q9H819 358 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 SNX24Q9Y343 169 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 TULP2O00295 520 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 APBA3O96018 575 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 CCDC172P0C7W6 258 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 SPATA31C1P0DKV0 1188 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 PDE6BP35913 854 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 SLCO1A2P46721 670 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 ASTE1Q2TB18 679 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-203ENST00000394419 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 SLC35G2Q8TBE7 412 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 RBM46Q8TBY0 533 aaKnown RBP11.45□□□□□ -0.58
ACTN1-203ENST00000394419 WHAMMQ8TF30 809 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 PBKQ96KB5 322 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 GANQ9H2C0 597 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 KCNMB3Q9NPA1 279 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 AIPL1Q9NZN9 384 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-203ENST00000394419 BUB1BO60566 1050 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-203ENST00000394419 ALAS1P13196 640 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 ERVK-9P63128 1117 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 HHIPL2Q6UWX4 724 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 GLG1Q92896 1179 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 P2RX7Q99572 595 aaKnown RBP11.45□□□□□ -0.58
ACTN1-203ENST00000394419 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.45□□□□□ -0.585e-7■■■□□ 15.3
ACTN1-203ENST00000394419 CCDC88AQ3V6T2 1871 aa11.45□□□□□ -0.58
ACTN1-203ENST00000394419 ZNF233A6NK53 670 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 TISP43B9A030 160 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 EYA4O95677 639 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 VPS41P49754 854 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 CLK2P49760 499 aaKnown RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 GTF2A1P52655 376 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 COBLL1Q53SF7 1204 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 FBXW10Q5XX13 1052 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 NSMFQ6X4W1 530 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 C15orf52Q6ZUT6 534 aaKnown RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 B4GALNT4Q76KP1 1039 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 MIER3Q7Z3K6 550 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 PODNQ7Z5L7 613 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 IRF2BP2Q7Z5L9 587 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 ARFGAP2Q8N6H7 521 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 TPCN2Q8NHX9 752 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 DYDC1Q8WWB3 177 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 SYN2Q92777 582 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 SLC35C1Q96A29 364 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 PRMT6Q96LA8 375 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 NYAP2Q9P242 653 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 AJAP1Q9UKB5 411 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 PITPNM2Q9BZ72 1349 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 MICALCLQ6ZW33 695 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 TADA2BQ86TJ2 420 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 CCDC105Q8IYK2 499 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 EHMT1Q9H9B1 1298 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 FAM198AQ9UFP1 575 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 ARAP2Q8WZ64 1704 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 ABCA3Q99758 1704 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 DDX3XO00571 662 aaKnown RBP eCLIP11.44□□□□□ -0.584e-18■■□□□ 14.2
ACTN1-203ENST00000394419 ATMINO43313 823 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 KRT5P13647 590 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 MAGOHBQ96A72 148 aaKnown RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 LXNQ9BS40 222 aa11.44□□□□□ -0.58
ACTN1-203ENST00000394419 DNAJC17Q9NVM6 304 aaKnown RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-203ENST00000394419 LCA5LO95447 670 aa11.43□□□□□ -0.58
ACTN1-203ENST00000394419 DLATP10515 647 aaKnown RBP11.43□□□□□ -0.58
ACTN1-203ENST00000394419 LSP1P33241 339 aa11.43□□□□□ -0.58
ACTN1-203ENST00000394419 HSD17B3P37058 310 aa11.43□□□□□ -0.58
ACTN1-203ENST00000394419 FMO5P49326 533 aa11.43□□□□□ -0.58
ACTN1-203ENST00000394419 CORO7P57737 925 aa11.43□□□□□ -0.58
ACTN1-203ENST00000394419 MAGOHP61326 146 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms