RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 NKX3-2P78367 333 aa26.91■■□□□ 1.9
LRFN4-202ENST00000393952 STK4Q13043 487 aa26.91■■□□□ 1.9
LRFN4-202ENST00000393952 GNASQ5JWF2 1037 aa26.91■■□□□ 1.9
LRFN4-202ENST00000393952 MLKLQ8NB16 471 aa26.91■■□□□ 1.9
LRFN4-202ENST00000393952 TIPINQ9BVW5 301 aa26.91■■□□□ 1.9
LRFN4-202ENST00000393952 SLC39A2Q9NP94 309 aa26.91■■□□□ 1.9
LRFN4-202ENST00000393952 GPRC5CQ9NQ84 441 aa26.91■■□□□ 1.9
LRFN4-202ENST00000393952 XPNPEP1Q9NQW7 623 aa26.91■■□□□ 1.9
LRFN4-202ENST00000393952 TBC1D7Q9P0N9 293 aa26.91■■□□□ 1.9
LRFN4-202ENST00000393952 CD44P16070 742 aaKnown RBP26.9■■□□□ 1.9
LRFN4-202ENST00000393952 ZNF131P52739 623 aa26.9■■□□□ 1.9
LRFN4-202ENST00000393952 LBX1P52954 281 aa26.9■■□□□ 1.9
LRFN4-202ENST00000393952 SOX10P56693 466 aa26.9■■□□□ 1.9
LRFN4-202ENST00000393952 EMC2Q15006 297 aa26.9■■□□□ 1.9
LRFN4-202ENST00000393952 FAM26FQ5R3K3 315 aa26.9■■□□□ 1.9
LRFN4-202ENST00000393952 FAM102BQ5T8I3 360 aa26.9■■□□□ 1.9
LRFN4-202ENST00000393952 KIAA0895Q8NCT3 520 aa26.9■■□□□ 1.9
LRFN4-202ENST00000393952 TRAPPC12Q8WVT3 735 aa26.9■■□□□ 1.9
LRFN4-202ENST00000393952 DHX33Q9H6R0 707 aaKnown RBP26.9■■□□□ 1.9
LRFN4-202ENST00000393952 CENPFP49454 3210 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 INSRRP14616 1297 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 GAP43P17677 238 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 RFC5P40937 340 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 PSMD2Q13200 908 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 MCPH1Q8NEM0 835 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 RBSNQ9H1K0 784 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 PARVGQ9HBI0 331 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 PPME1Q9Y570 386 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 PCDHA2Q9Y5H9 948 aa26.89■■□□□ 1.9
LRFN4-202ENST00000393952 CHMP4BP1P59074 171 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 PURAQ00577 322 aaKnown RBP26.88■■□□□ 1.89
LRFN4-202ENST00000393952 GSE1Q14687 1217 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 CTU1Q7Z7A3 348 aaKnown RBP26.88■■□□□ 1.89
LRFN4-202ENST00000393952 MYCT1Q8N699 235 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 RNF214Q8ND24 703 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 SLC7A3Q8WY07 619 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 FGFBP2Q9BYJ0 223 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 MAPK8IP1Q9UQF2 711 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 FRMPD3Q5JV73 1810 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 PPP1R3GB7ZBB8 358 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 KPNA6O60684 536 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 CTCFP49711 727 aaPredicted RBP26.88■■□□□ 1.89
LRFN4-202ENST00000393952 PSEN2P49810 448 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 ZNF165P49910 485 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 TBC1D8BQ0IIM8 1120 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 MFSD10Q14728 455 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 KIAA0753Q2KHM9 967 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 SLC9C1Q4G0N8 1177 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 ZNF484Q5JVG2 852 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 GLIS3Q8NEA6 775 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 KLHDC9Q8NEP7 349 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 DRC1Q96MC2 740 aa26.88■■□□□ 1.89
LRFN4-202ENST00000393952 KAT6AQ92794 2004 aa26.87■■□□□ 1.89
LRFN4-202ENST00000393952 MSCO60682 206 aa26.87■■□□□ 1.89
LRFN4-202ENST00000393952 MAFO75444 373 aaPredicted RBP26.87■■□□□ 1.89
LRFN4-202ENST00000393952 MYCNP04198 464 aaPredicted RBP26.87■■□□□ 1.89
LRFN4-202ENST00000393952 PRCPP42785 496 aa26.87■■□□□ 1.89
LRFN4-202ENST00000393952 IGBP1P78318 339 aa26.87■■□□□ 1.89
LRFN4-202ENST00000393952 GTPBP4Q9BZE4 634 aaKnown RBP26.87■■□□□ 1.89
LRFN4-202ENST00000393952 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.87■■□□□ 1.89
LRFN4-202ENST00000393952 CBX8Q9HC52 389 aa26.87■■□□□ 1.89
LRFN4-202ENST00000393952 DACH1Q9UI36 760 aa26.87■■□□□ 1.89
LRFN4-202ENST00000393952 HAS3O00219 553 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 ZEB2O60315 1214 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 PPFIA1Q13136 1202 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 LRRC41Q15345 812 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 ODR4Q5SWX8 454 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 LHX8Q68G74 356 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 KLHL10Q6JEL2 608 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 FAM200AQ8TCP9 573 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 PPP1R13LQ8WUF5 828 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 TMEM143Q96AN5 459 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 NAT10Q9H0A0 1025 aaKnown RBP26.86■■□□□ 1.89
LRFN4-202ENST00000393952 UNC93B1Q9H1C4 597 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 POLR3FQ9H1D9 316 aaPredicted RBP26.86■■□□□ 1.89
LRFN4-202ENST00000393952 COL1A2P08123 1366 aa26.86■■□□□ 1.89
LRFN4-202ENST00000393952 CAVIN2O95810 425 aa26.85■■□□□ 1.89
LRFN4-202ENST00000393952 CST5P28325 142 aaPredicted RBP26.85■■□□□ 1.89
LRFN4-202ENST00000393952 ADSSL1Q8N142 457 aa26.85■■□□□ 1.89
LRFN4-202ENST00000393952 KIFAP3Q92845 792 aa26.85■■□□□ 1.89
LRFN4-202ENST00000393952 ZBTB10Q96DT7 871 aa26.85■■□□□ 1.89
LRFN4-202ENST00000393952 MTG1Q9BT17 334 aaPredicted RBP26.85■■□□□ 1.89
LRFN4-202ENST00000393952 OLFML3Q9NRN5 406 aa26.85■■□□□ 1.89
LRFN4-202ENST00000393952 SEL1LQ9UBV2 794 aa26.85■■□□□ 1.89
LRFN4-202ENST00000393952 C22orf31O95567 290 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 SMIM10L2AP0DMW4 78 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 SMIM10L2BP0DMW5 78 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 PLS3P13797 630 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 GRIK4Q16099 956 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 CCSAPQ6IQ19 270 aaPredicted RBP26.84■■□□□ 1.89
LRFN4-202ENST00000393952 CXCL17Q6UXB2 119 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 BSNDQ8WZ55 320 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 FIZ1Q96SL8 496 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 KATNAL1Q9BW62 490 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 MRPL44Q9H9J2 332 aaKnown RBP26.84■■□□□ 1.89
LRFN4-202ENST00000393952 LARSQ9P2J5 1176 aaKnown RBP26.84■■□□□ 1.89
LRFN4-202ENST00000393952 IGKV6-21A0A0C4DH24 114 aa26.84■■□□□ 1.89
LRFN4-202ENST00000393952 MYCP01106 439 aaPredicted RBP26.84■■□□□ 1.89
LRFN4-202ENST00000393952 NMT1P30419 496 aaKnown RBP26.84■■□□□ 1.89
LRFN4-202ENST00000393952 CASP5P51878 434 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms