RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 RBM28Q9NW13 759 aaKnown RBP17.5■□□□□ 0.39
CHMP3-202ENST00000393773 TMEM161AQ9NX61 479 aa17.5■□□□□ 0.39
CHMP3-202ENST00000393773 MYO10Q9HD67 2058 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 LAG3P18627 525 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 VCPP55072 806 aaKnown RBP17.49■□□□□ 0.39
CHMP3-202ENST00000393773 APOBRQ0VD83 1088 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 PTPN21Q16825 1174 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 KIZQ2M2Z5 673 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 ZNF484Q5JVG2 852 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 PDE12Q6L8Q7 609 aaKnown RBP17.49■□□□□ 0.39
CHMP3-202ENST00000393773 TMEM184AQ6ZMB5 413 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 RASGRP4Q8TDF6 673 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 PRRX2Q99811 253 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 S1PR5Q9H228 398 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 ELAC1Q9H777 363 aaKnown RBP17.49■□□□□ 0.39
CHMP3-202ENST00000393773 ZNF302Q9NR11 478 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
CHMP3-202ENST00000393773 BARHL2Q9NY43 387 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 LZTS1Q9Y250 596 aa17.49■□□□□ 0.39
CHMP3-202ENST00000393773 ZFHX2Q9C0A1 2572 aaPredicted RBP17.48■□□□□ 0.39
CHMP3-202ENST00000393773 GPR182O15218 404 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 GPR32O75388 356 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 FAM189BP81408 668 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 RTN1Q16799 776 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 ODR4Q5SWX8 454 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 PLPP4Q5VZY2 271 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 PDXDC2PQ6P474 469 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 SYCE2Q6PIF2 218 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 MICAL1Q8TDZ2 1067 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 MRPS27Q92552 414 aaKnown RBP17.48■□□□□ 0.39
CHMP3-202ENST00000393773 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
CHMP3-202ENST00000393773 SMCO2A6NFE2 343 aa17.47■□□□□ 0.39
CHMP3-202ENST00000393773 VTNP04004 478 aa17.47■□□□□ 0.39
CHMP3-202ENST00000393773 CRYBB1P53674 252 aaPredicted RBP17.47■□□□□ 0.39
CHMP3-202ENST00000393773 PLCB3Q01970 1234 aa17.47■□□□□ 0.39
CHMP3-202ENST00000393773 ANKRD54Q6NXT1 300 aa17.47■□□□□ 0.39
CHMP3-202ENST00000393773 LRRC55Q6ZSA7 311 aa17.47■□□□□ 0.39
CHMP3-202ENST00000393773 PLA2G4DQ86XP0 818 aa17.47■□□□□ 0.39
CHMP3-202ENST00000393773 LINC01465Q8N7H1 131 aa17.47■□□□□ 0.39
CHMP3-202ENST00000393773 ATP6V0A4Q9HBG4 840 aa17.47■□□□□ 0.39
CHMP3-202ENST00000393773 MAFBQ9Y5Q3 323 aaPredicted RBP17.47■□□□□ 0.39
CHMP3-202ENST00000393773 C2orf16Q68DN1 1984 aa17.47■□□□□ 0.39
CHMP3-202ENST00000393773 SPTBN4Q9H254 2564 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 HIDE1A8MVS5 230 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 IPO5O00410 1097 aaKnown RBP17.46■□□□□ 0.39
CHMP3-202ENST00000393773 SRGAP2BP0DMP2 458 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 PBX3P40426 434 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 TECP42680 631 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 SWSAP1Q6NVH7 229 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 MIS18BP1Q6P0N0 1132 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 LRRC43Q8N309 656 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 BBXQ8WY36 941 aaPredicted RBP17.46■□□□□ 0.39
CHMP3-202ENST00000393773 TCEANC2Q96MN5 208 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 CASD1Q96PB1 797 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 TCF25Q9BQ70 676 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 TMEM117Q9H0C3 514 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 ANO2Q9NQ90 1003 aa17.46■□□□□ 0.39
CHMP3-202ENST00000393773 FAM217BQ9NTX9 383 aaPredicted RBP17.46■□□□□ 0.39
CHMP3-202ENST00000393773 ADAMTS3O15072 1205 aa17.45■□□□□ 0.38
CHMP3-202ENST00000393773 ZBTB43O43298 467 aa17.45■□□□□ 0.38
CHMP3-202ENST00000393773 CYP3A4P08684 503 aa17.45■□□□□ 0.38
CHMP3-202ENST00000393773 CLCN3P51790 818 aa17.45■□□□□ 0.38
CHMP3-202ENST00000393773 EXOSC10Q01780 885 aaKnown RBP17.45■□□□□ 0.38
CHMP3-202ENST00000393773 ZNF746Q6NUN9 644 aaPredicted RBP17.45■□□□□ 0.38
CHMP3-202ENST00000393773 LLGL2Q6P1M3 1020 aa17.45■□□□□ 0.38
CHMP3-202ENST00000393773 SYNE3Q6ZMZ3 975 aa17.45■□□□□ 0.38
CHMP3-202ENST00000393773 GLT8D2Q9H1C3 349 aa17.45■□□□□ 0.38
CHMP3-202ENST00000393773 ENTPD7Q9NQZ7 604 aa17.45■□□□□ 0.38
CHMP3-202ENST00000393773 CDH22Q9UJ99 828 aa17.45■□□□□ 0.38
CHMP3-202ENST00000393773 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
CHMP3-202ENST00000393773 GOLGA8AA7E2F4 631 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 GOLGA8BA8MQT2 603 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 CDC27P30260 824 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 PPM1AP35813 382 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 ZNF76P36508 570 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 SETQ01105 290 aaPredicted RBP17.44■□□□□ 0.38
CHMP3-202ENST00000393773 JAKMIP3Q5VZ66 844 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 KCNT2Q6UVM3 1135 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 CKAP2LQ8IYA6 745 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 APOL5Q9BWW9 433 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 ADAMTS10Q9H324 1103 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 FAM86C1Q9NVL1 165 aa17.44■□□□□ 0.38
CHMP3-202ENST00000393773 WDR87Q6ZQQ6 2873 aa17.43■□□□□ 0.38
CHMP3-202ENST00000393773 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
CHMP3-202ENST00000393773 HOXA2O43364 376 aa17.43■□□□□ 0.38
CHMP3-202ENST00000393773 ST18O60284 1047 aa17.43■□□□□ 0.38
CHMP3-202ENST00000393773 PDGFBP01127 241 aaPredicted RBP17.43■□□□□ 0.38
CHMP3-202ENST00000393773 SP100P23497 879 aaPredicted RBP17.43■□□□□ 0.38
CHMP3-202ENST00000393773 CLLU1OSQ5K130 101 aa17.43■□□□□ 0.38
CHMP3-202ENST00000393773 SMAP1Q8IYB5 467 aaPredicted RBP17.43■□□□□ 0.38
CHMP3-202ENST00000393773 METTL13Q8N6R0 699 aa17.43■□□□□ 0.38
CHMP3-202ENST00000393773 ZNF558Q96NG5 402 aa17.43■□□□□ 0.38
CHMP3-202ENST00000393773 ZNF577Q9BSK1 485 aa17.43■□□□□ 0.38
CHMP3-202ENST00000393773 NGRNQ9NPE2 291 aaKnown RBP17.43■□□□□ 0.38
CHMP3-202ENST00000393773 NID2Q14112 1375 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 KLF18A0A0U1RQI7 1052 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 HOXB8P17481 243 aaPredicted RBP17.42■□□□□ 0.38
CHMP3-202ENST00000393773 AVPR2P30518 371 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 RCAN1P53805 252 aa17.42■□□□□ 0.38
CHMP3-202ENST00000393773 PFKFB3Q16875 520 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms