RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TCF7P36402 384 aaPredicted RBP9.52□□□□□ -0.89
TDP1-203ENST00000393454 PBX1P40424 430 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 DNM2P50570 870 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 STAT5BP51692 787 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 PEX3P56589 373 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 RBL2Q08999 1139 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 TBC1D8BQ0IIM8 1120 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 EDRF1Q3B7T1 1238 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 CELF3Q5SZQ8 465 aaKnown RBP9.52□□□□□ -0.89
TDP1-203ENST00000393454 FKBP15Q5T1M5 1219 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 MORC4Q8TE76 937 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 SCFD2Q8WU76 684 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 COPS5Q92905 334 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 SPATA33Q96N06 139 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 AZI2Q9H6S1 392 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 CYP26B1Q9NR63 512 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.52□□□□□ -0.89
TDP1-203ENST00000393454 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
TDP1-203ENST00000393454 CCDC169A6NNP5 214 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 AKR1B15C9JRZ8 316 aaPredicted RBP9.51□□□□□ -0.89
TDP1-203ENST00000393454 ZNF500O60304 480 aaPredicted RBP9.51□□□□□ -0.89
TDP1-203ENST00000393454 GNA14O95837 355 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 OATP04181 439 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 SLC10A3P09131 477 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 RPL13P26373 211 aaKnown RBP9.51□□□□□ -0.89
TDP1-203ENST00000393454 CCZ1BP86790 482 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 CCZ1P86791 482 aaPredicted RBP9.51□□□□□ -0.89
TDP1-203ENST00000393454 MAN2A1Q16706 1144 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 VWA3BQ502W6 1294 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 CEP135Q66GS9 1140 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 IFNL1Q8IU54 200 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 SMC1BQ8NDV3 1235 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 KIAA1524Q8TCG1 905 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 GLG1Q92896 1179 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 CCDC102AQ96A19 550 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 FIZ1Q96SL8 496 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 NRBP2Q9NSY0 501 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 TRAF3IP3Q9Y228 551 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 TLL2Q9Y6L7 1015 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 UBE4BO95155 1302 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 ITIH6Q6UXX5 1313 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 NKRFO15226 690 aaKnown RBP eCLIP9.51□□□□□ -0.89
TDP1-203ENST00000393454 SLC16A4O15374 487 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 DGAT1O75907 488 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 NR3C1P04150 777 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 ATP4AP20648 1035 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 CASP14P31944 242 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 SMTNP53814 917 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 POLGP54098 1239 aaPredicted RBP9.51□□□□□ -0.89
TDP1-203ENST00000393454 SOX10P56693 466 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 INHBEP58166 350 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 GRB14Q14449 540 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 NOLC1Q14978 699 aaKnown RBP eCLIP9.51□□□□□ -0.89
TDP1-203ENST00000393454 MIIPQ5JXC2 388 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 TMEM63BQ5T3F8 832 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 CCDC62Q6P9F0 684 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 HS2ST1Q7LGA3 356 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 MCPH1Q8NEM0 835 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 KIFAP3Q92845 792 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 PCYT2Q99447 389 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 GPR20Q99678 358 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 IKZF4Q9H2S9 585 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 NDST4Q9H3R1 872 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 ATP6V0A4Q9HBG4 840 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.51□□□□□ -0.89
TDP1-203ENST00000393454 SLC5A4Q9NY91 659 aa9.51□□□□□ -0.89
TDP1-203ENST00000393454 ARID2Q68CP9 1835 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 IGKV6D-21A0A0A0MT36 114 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 A0A1W2PQC6 194 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 SLC15A5A6NIM6 579 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 TGFB1I1O43294 461 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 MAPTP10636 758 aaKnown RBP9.5□□□□□ -0.89
TDP1-203ENST00000393454 MARK3P27448 753 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 CLCN1P35523 988 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 SREBF2Q12772 1141 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 DMP1Q13316 513 aaPredicted RBP9.5□□□□□ -0.89
TDP1-203ENST00000393454 ALCAMQ13740 583 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 SYCP1Q15431 976 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 HSDL1Q3SXM5 330 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 HAUS6Q7Z4H7 955 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 ZNF467Q7Z7K2 595 aaPredicted RBP9.5□□□□□ -0.89
TDP1-203ENST00000393454 TC2NQ8N9U0 490 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 CCDC112Q8NEF3 446 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 ACCSQ96QU6 501 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 GBP3Q9H0R5 595 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 ZFYVE28Q9HCC9 887 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 ZCCHC17Q9NP64 241 aaKnown RBP9.5□□□□□ -0.89
TDP1-203ENST00000393454 VTA1Q9NP79 307 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 KMT5AQ9NQR1 393 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 DIS3Q9Y2L1 958 aaKnown RBP9.5□□□□□ -0.89
TDP1-203ENST00000393454 ZMYM2Q9UBW7 1377 aa9.5□□□□□ -0.89
TDP1-203ENST00000393454 TMEM88BA6NKF7 163 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 GYPCP04921 128 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 EPB41P11171 864 aaKnown RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 CYP2J2P51589 502 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 TRIM14Q14142 442 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 EMC2Q15006 297 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 TAPT1Q6NXT6 567 aa9.49□□□□□ -0.89
TDP1-203ENST00000393454 ZC3H3Q8IXZ2 948 aaKnown RBP9.49□□□□□ -0.89
TDP1-203ENST00000393454 SLC17A8Q8NDX2 589 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms