RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 FAM155AB1AL88 458 aaPredicted RBP19.28■□□□□ 0.68
MBD4-202ENST00000393278 KIF3CO14782 793 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 DGAT1O75907 488 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 GNA14O95837 355 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 OATP04181 439 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 MARSP56192 900 aaKnown RBP19.28■□□□□ 0.68
MBD4-202ENST00000393278 ALCAMQ13740 583 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 TTLL4Q14679 1199 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 IFNL1Q8IU54 200 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 SCFD2Q8WU76 684 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 VTA1Q9NP79 307 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 GPRC5CQ9NQ84 441 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 PDLIM7Q9NR12 457 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 PDGFCQ9NRA1 345 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 ZNF236Q9UL36 1845 aa19.28■□□□□ 0.68
MBD4-202ENST00000393278 SLC15A5A6NIM6 579 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 K7ENM7 598 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 PES1O00541 588 aaKnown RBP19.27■□□□□ 0.68
MBD4-202ENST00000393278 CETN3O15182 167 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 NKRFO15226 690 aaKnown RBP eCLIP19.27■□□□□ 0.68
MBD4-202ENST00000393278 TGFB1I1O43294 461 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 TXNP10599 105 aaKnown RBP19.27■□□□□ 0.68
MBD4-202ENST00000393278 SKILP12757 684 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 NR2F2P24468 414 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 TCF7P36402 384 aaPredicted RBP19.27■□□□□ 0.68
MBD4-202ENST00000393278 ADAM9Q13443 819 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 MAN2A1Q16706 1144 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 FAM102BQ5T8I3 360 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 FAM160B1Q5W0V3 765 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 MAMDC4Q6UXC1 1216 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 DPP9Q86TI2 863 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 SMC1BQ8NDV3 1235 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 CCDC102AQ96A19 550 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 GPR20Q99678 358 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 ST6GALNAC4Q9H4F1 302 aa19.27■□□□□ 0.68
MBD4-202ENST00000393278 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.27■□□□□ 0.684e-12■■□□□ 11.8
MBD4-202ENST00000393278 MYH9P35579 1960 aaKnown RBP19.27■□□□□ 0.68
MBD4-202ENST00000393278 CLCN1P35523 988 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 STAT5BP51692 787 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 NFIL3Q16649 462 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 CCDC40Q4G0X9 1142 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 VWA3BQ502W6 1294 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 TAPT1Q6NXT6 567 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 PPFIBP1Q86W92 1011 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 DHX37Q8IY37 1157 aaKnown RBP19.27■□□□□ 0.67
MBD4-202ENST00000393278 TC2NQ8N9U0 490 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 MCPH1Q8NEM0 835 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 KIFAP3Q92845 792 aa19.27■□□□□ 0.67
MBD4-202ENST00000393278 NIFKQ9BYG3 293 aaKnown RBP19.27■□□□□ 0.67
MBD4-202ENST00000393278 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.27■□□□□ 0.67
MBD4-202ENST00000393278 RBM47A0AV96 593 aaKnown RBP19.26■□□□□ 0.67
MBD4-202ENST00000393278 NR3C1P04150 777 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 NCKAP1LP55160 1127 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 GOLGA8FQ08AF8 430 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 GOLGA8DPQ0D2H9 430 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 TRIM14Q14142 442 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 HSDL1Q3SXM5 330 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 MTERF2Q49AM1 385 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 CEP135Q66GS9 1140 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 KSR1Q8IVT5 923 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 SLC17A8Q8NDX2 589 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 MAML3Q96JK9 1138 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 KATNBL1Q9H079 304 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 TMX1Q9H3N1 280 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 C17orf75Q9HAS0 396 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 ATP6V0A4Q9HBG4 840 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 XPNPEP1Q9NQW7 623 aa19.26■□□□□ 0.67
MBD4-202ENST00000393278 AKR1B15C9JRZ8 316 aaPredicted RBP19.25■□□□□ 0.67
MBD4-202ENST00000393278 NOP56O00567 594 aaKnown RBP19.25■□□□□ 0.67
MBD4-202ENST00000393278 NRDCO43847 1150 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 TLR2O60603 784 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 LGR5O75473 907 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 GYPCP04921 128 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 RPL13P26373 211 aaKnown RBP19.25■□□□□ 0.67
MBD4-202ENST00000393278 PEX3P56589 373 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 RBL2Q08999 1139 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 TBC1D8BQ0IIM8 1120 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 SREBF2Q12772 1141 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 C17orf99Q6UX52 265 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 CCDC112Q8NEF3 446 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 COPS5Q92905 334 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 SPATA33Q96N06 139 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 NDST4Q9H3R1 872 aa19.25■□□□□ 0.67
MBD4-202ENST00000393278 ABT1Q9ULW3 272 aaKnown RBP19.25■□□□□ 0.67
MBD4-202ENST00000393278 SNAI1O95863 264 aaPredicted RBP19.24■□□□□ 0.67
MBD4-202ENST00000393278 ADKP55263 362 aaKnown RBP19.24■□□□□ 0.67
MBD4-202ENST00000393278 RTP1P59025 263 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 FKBP15Q5T1M5 1219 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 TMEM63BQ5T3F8 832 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 TRIM59Q8IWR1 403 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 HHIPL1Q96JK4 782 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 ERGIC2Q96RQ1 377 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 GBP3Q9H0R5 595 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 AZI2Q9H6S1 392 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 NRBP2Q9NSY0 501 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 TMEM88BA6NKF7 163 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 TPM1P09493 284 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 GTF2BQ00403 316 aa19.24■□□□□ 0.67
MBD4-202ENST00000393278 DMP1Q13316 513 aaPredicted RBP19.24■□□□□ 0.67
MBD4-202ENST00000393278 TARBP2Q15633 366 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms