RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 AP1M1Q9BXS5 423 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 NACAP1Q9BZK3 213 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ANKRD2Q9GZV1 360 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 SCHIP1Q9P0W5 487 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ZFP69BQ9UJL9 534 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 IKBKGQ9Y6K9 419 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 MINDY4BA8MYZ0 360 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 FOXN1O15353 648 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 SLC5A1P13866 664 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 RPL13P26373 211 aaKnown RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 KCNQ4P56696 695 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 DSG1Q02413 1049 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 PABPC4Q13310 644 aaKnown RBP eCLIP8.19□□□□□ -1.14e-7■■■□□ 17.1
VTI1A-201ENST00000393077 LRRC74BQ6ZQY2 392 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 NCOA7Q8NI08 942 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 PI4K2BQ8TCG2 481 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 EAF2Q96CJ1 260 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ZNF184Q99676 751 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 POLR3CQ9BUI4 534 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 TMEM60Q9H2L4 133 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 CTNNAL1Q9UBT7 734 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ZNF510Q9Y2H8 683 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 WDR91A4D1P6 747 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ZSCAN5CA6NGD5 496 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 MATN2O00339 956 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ABL1P00519 1130 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ATP6V1B1P15313 513 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 PDIA3P30101 505 aaKnown RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ARL1P40616 181 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ZFYVE27Q5T4F4 411 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 SCAIQ8N9R8 606 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 RSPH1Q8WYR4 309 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 PPP2R3CQ969Q6 453 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 SKA1Q96BD8 255 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 THAP11Q96EK4 314 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 FAM161BQ96MY7 647 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 FNBP1Q96RU3 617 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 GPHNQ9NQX3 736 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 DNAJC17Q9NVM6 304 aaKnown RBP8.19□□□□□ -1.1
VTI1A-201ENST00000393077 NMRK1Q9NWW6 199 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 TRIM33Q9UPN9 1127 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 DOLKQ9UPQ8 538 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ATP11BQ9Y2G3 1177 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 TRIM17Q9Y577 477 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 SIGLEC1Q9BZZ2 1709 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 PGRMC1O00264 195 aaKnown RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 O00370 1275 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 DAPK3O43293 454 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 MARCH6O60337 910 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 WFS1O76024 890 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 FUT4P22083 530 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 RFC4P35249 363 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ST3GAL1Q11201 340 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 IZUMO2Q6UXV1 221 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 PTF1AQ7RTS3 328 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 DDX42Q86XP3 938 aaKnown RBP eCLIP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 RUNDC3BQ96NL0 473 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 GSDMAQ96QA5 445 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ZBED2Q9BTP6 218 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 MAK16Q9BXY0 300 aaKnown RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 NT5C3AQ9H0P0 336 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 BLZF1Q9H2G9 400 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ANLNQ9NQW6 1124 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ZC4H2Q9NQZ6 224 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 INTS13Q9NVM9 706 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 SELENONQ9NZV5 590 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 SEL1LQ9UBV2 794 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 PARP2Q9UGN5 583 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 HBS1LQ9Y450 684 aaKnown RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ARHGEF28Q8N1W1 1705 aaKnown RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 SMIM31A0A1B0GVY4 71 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 BICDL2A1A5D9 508 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 HTR3EA5X5Y0 456 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ZNF213O14771 459 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ASMTLO95671 621 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 OCM2P0CE71 109 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 OCMP0CE72 109 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 MYCLP1P12525 358 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 KIF11P52732 1056 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 MAP3K7CLP57077 242 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 KIF23Q02241 960 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 SLC34A1Q06495 639 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ZNF844Q08AG5 666 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 GSTA3Q16772 222 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 TNNI3KQ59H18 835 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 CAVIN4Q5BKX8 364 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 ERMARDQ5T6L9 678 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 C1orf228Q6PIY5 440 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 KRT26Q7Z3Y9 468 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 CROCCP3Q8IVE0 287 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 GIPC3Q8TF64 312 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 THAP9Q9H5L6 903 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 PAG1Q9NWQ8 432 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 LRRC42Q9Y546 428 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 GPC6Q9Y625 555 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-201ENST00000393077 FPGT-TNNI3KV9GXZ4 949 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 DIP2AQ14689 1571 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 EYA2O00167 538 aa8.18□□□□□ -1.1
VTI1A-201ENST00000393077 RAD51CO43502 376 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms