RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SARSP49591 514 aaKnown RBP18.74■□□□□ 0.59
PTPRK-208ENST00000392449 HYAL1Q12794 435 aa18.74■□□□□ 0.59
PTPRK-208ENST00000392449 LRCH2Q5VUJ6 765 aa18.74■□□□□ 0.59
PTPRK-208ENST00000392449 BLIDQ8IZY5 108 aa18.74■□□□□ 0.59
PTPRK-208ENST00000392449 PABPC5Q96DU9 382 aaKnown RBP18.74■□□□□ 0.59
PTPRK-208ENST00000392449 TM6SF1Q9BZW5 370 aa18.74■□□□□ 0.59
PTPRK-208ENST00000392449 KCNJ14Q9UNX9 436 aa18.74■□□□□ 0.59
PTPRK-208ENST00000392449 PLAGL2Q9UPG8 496 aa18.74■□□□□ 0.59
PTPRK-208ENST00000392449 RWDD3Q9Y3V2 267 aa18.74■□□□□ 0.59
PTPRK-208ENST00000392449 DENND3A2RUS2 1198 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 EPB41L2O43491 1005 aaKnown RBP18.73■□□□□ 0.59
PTPRK-208ENST00000392449 DEXIO95424 95 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 OATP04181 439 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 ITGB1P05556 798 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 STAG3L1P0CL83 205 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 LTBRP36941 435 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 USP11P51784 963 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 DLX2Q07687 328 aaPredicted RBP18.73■□□□□ 0.59
PTPRK-208ENST00000392449 SCRN1Q12765 414 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 COL19A1Q14993 1142 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 CLUL1Q15846 466 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 FAM102BQ5T8I3 360 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 EFCAB12Q6NXP0 572 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 LINC01465Q8N7H1 131 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 KLHL23Q8NBE8 558 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 GJB4Q9NTQ9 266 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 AKT3Q9Y243 479 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 PCDHGC5Q9Y5F6 944 aa18.73■□□□□ 0.59
PTPRK-208ENST00000392449 GRXCR2A6NFK2 248 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 LINC01565O15544 149 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 MMP1P03956 469 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 NEFLP07196 543 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 FGFR1P11362 822 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 IRS1P35568 1242 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 CRYBB1P53674 252 aaPredicted RBP18.72■□□□□ 0.59
PTPRK-208ENST00000392449 NLRP11P59045 1033 aaKnown RBP18.72■□□□□ 0.59
PTPRK-208ENST00000392449 RIT2Q99578 217 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 SH2D3AQ9BRG2 576 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 TEKT3Q9BXF9 490 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 IGFLR1Q9H665 355 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 RGS18Q9NS28 235 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 PCDHB7Q9Y5E2 793 aa18.72■□□□□ 0.59
PTPRK-208ENST00000392449 C9IYK1 514 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 PSMD10O75832 226 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 DRP2Q13474 957 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 INF2Q27J81 1249 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 ADGRD2Q7Z7M1 963 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 FAM178BQ8IXR5 827 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 FAM167AQ96KS9 214 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 PLVAPQ9BX97 442 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 LMAN2LQ9H0V9 348 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 ADAMTS10Q9H324 1103 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 CEP131Q9UPN4 1083 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 TBKBP1A7MCY6 615 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 GPR182O15218 404 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 SLC37A4O43826 429 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 FGFR4P22455 802 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 Q4G0T1 1027 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 SLC24A5Q71RS6 500 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 MIER3Q7Z3K6 550 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 DAGLBQ8NCG7 672 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 ETNPPLQ8TBG4 499 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 SPPL3Q8TCT6 385 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 TPCN1Q9ULQ1 816 aa18.71■□□□□ 0.59
PTPRK-208ENST00000392449 FAM86C2PA6NEL3 165 aa18.7■□□□□ 0.58
PTPRK-208ENST00000392449 MAGEB2O15479 319 aa18.7■□□□□ 0.58
PTPRK-208ENST00000392449 TBX10O75333 385 aa18.7■□□□□ 0.58
PTPRK-208ENST00000392449 CSDE1O75534 798 aaKnown RBP18.7■□□□□ 0.58
PTPRK-208ENST00000392449 JAK3P52333 1124 aa18.7■□□□□ 0.58
PTPRK-208ENST00000392449 DSC3Q14574 896 aa18.7■□□□□ 0.58
PTPRK-208ENST00000392449 CTC1Q2NKJ3 1217 aa18.7■□□□□ 0.58
PTPRK-208ENST00000392449 POF1BQ8WVV4 589 aa18.7■□□□□ 0.58
PTPRK-208ENST00000392449 P2RX5Q93086 422 aa18.7■□□□□ 0.58
PTPRK-208ENST00000392449 MAP7D2Q96T17 732 aa18.7■□□□□ 0.58
PTPRK-208ENST00000392449 SEPT9Q9UHD8 586 aaPredicted RBP18.7■□□□□ 0.58
PTPRK-208ENST00000392449 CYP3A7-CYP3A51PA0A087WV96 503 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 STBD1O95210 358 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 CYP3A7P24462 503 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 SFNP31947 248 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 SSTR3P32745 418 aaPredicted RBP18.69■□□□□ 0.58
PTPRK-208ENST00000392449 NONOQ15233 471 aaKnown RBP eCLIP18.69■□□□□ 0.58
PTPRK-208ENST00000392449 MTERF2Q49AM1 385 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 SPOUT1Q5T280 376 aaKnown RBP18.69■□□□□ 0.58
PTPRK-208ENST00000392449 CPLX2Q6PUV4 134 aaKnown RBP18.69■□□□□ 0.58
PTPRK-208ENST00000392449 B3GNT9Q6UX72 402 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 GJD3Q8N144 294 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 OXER1Q8TDS5 423 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 MBOAT7Q96N66 472 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 C11orf16Q9NQ32 467 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 C1orf112Q9NSG2 853 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 NRBP2Q9NSY0 501 aa18.69■□□□□ 0.58
PTPRK-208ENST00000392449 DDX25Q9UHL0 483 aaKnown RBP18.69■□□□□ 0.58
PTPRK-208ENST00000392449 CTDNEP1O95476 244 aa18.68■□□□□ 0.58
PTPRK-208ENST00000392449 GPC3P51654 580 aa18.68■□□□□ 0.58
PTPRK-208ENST00000392449 TBC1D8BQ0IIM8 1120 aa18.68■□□□□ 0.58
PTPRK-208ENST00000392449 TARBP2Q15633 366 aaKnown RBP18.68■□□□□ 0.58
PTPRK-208ENST00000392449 LETM2Q2VYF4 491 aa18.68■□□□□ 0.58
PTPRK-208ENST00000392449 RBM23Q86U06 439 aaKnown RBP18.68■□□□□ 0.58
PTPRK-208ENST00000392449 PHF20Q9BVI0 1012 aa18.68■□□□□ 0.58
PTPRK-208ENST00000392449 C1QTNF1Q9BXJ1 281 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms