RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 FBXO42Q6P3S6 717 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 KCNV1Q6PIU1 500 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 FAM111BQ6SJ93 734 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 ARHGAP36Q6ZRI8 547 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 LRRC55Q6ZSA7 311 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 MICALCLQ6ZW33 695 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 HTR3DQ70Z44 454 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 METTL16Q86W50 562 aaKnown RBP2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 NLGN4XQ8N0W4 816 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 SEC16BQ96JE7 1060 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 RPL10LQ96L21 214 aaKnown RBP2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 BCL11AQ9H165 835 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 OR10A5Q9H207 317 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 UCKL1Q9NWZ5 548 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 ASXL2Q76L83 1435 aa2.68□□□□□ -1.98
RNU6-239P-201ENST00000390990 UBE2QL1A1L167 161 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 BLACEA4D250 179 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 ZNF185O15231 689 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 DDAH1O94760 285 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 AMY2AP04746 511 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 AMY2BP19961 511 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 PTTG1IPP53801 180 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 SMAD3P84022 425 aaKnown RBP2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 SEC23AQ15436 765 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 SLC10A6Q3KNW5 377 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 OSTM1Q86WC4 334 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 PTRH1Q86Y79 214 aaKnown RBP2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 ELOA2Q8IYF1 753 aaPredicted RBP2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 IFNL3Q8IZI9 196 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 ZFYVE21Q9BQ24 234 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 RSAD1Q9HA92 442 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 TESQ9UGI8 421 aaKnown RBP2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 ATP23Q9Y6H3 246 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 COL11A2P13942 1736 aaPredicted RBP2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 SPATA31A6Q5VVP1 1343 aa2.67□□□□□ -1.98
RNU6-239P-201ENST00000390990 COL3A1P02461 1466 aaPredicted RBP2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 CENPVL1A0A0U1RR11 272 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 C2orf78A6NCI8 922 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 PRAMEF25A6NGN4 478 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 RGS19P49795 217 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 HERVK_113P62684 666 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 GPR19Q15760 415 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 SP5Q6BEB4 398 aaPredicted RBP2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 STYK1Q6J9G0 422 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 Q6YL49 198 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 CXorf67Q86X51 503 aaPredicted RBP2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 MB21D1Q8N884 522 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 FAM98AQ8NCA5 519 aaKnown RBP2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 WDR48Q8TAF3 677 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 ATXN2LQ8WWM7 1075 aaKnown RBP2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 KRTAP1-5Q9BYS1 174 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 SLC6A15Q9H2J7 730 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 CYP4F11Q9HBI6 524 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 ACTR10Q9NZ32 417 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 FRMD4BQ9Y2L6 1034 aa2.66□□□□□ -1.98
RNU6-239P-201ENST00000390990 GOLGA6L6A8MZA4 724 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 KCNK3O14649 394 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 PRODHO43272 600 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 LPXNO60711 386 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 MMEP08473 750 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 KRT15P19012 456 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 CTGFP29279 349 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 ZEB1P37275 1124 aaPredicted RBP2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 JAM2P57087 298 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 BPIFB4P59827 614 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 TIGD2Q4W5G0 525 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 PLEKHG4Q58EX7 1191 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 FIGNQ5HY92 759 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 FKBP15Q5T1M5 1219 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 HDGFL2Q7Z4V5 671 aaPredicted RBP2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 ANKRD53Q8N9V6 530 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 C9orf106Q8NAJ2 232 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 CPT1CQ8TCG5 803 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 SCARB1Q8WTV0 552 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 OSBP2Q969R2 916 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 ZNF768Q9H5H4 540 aaKnown RBP2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 RNF7Q9UBF6 113 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 MAGEL2Q9UJ55 1249 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 STRIP2Q9ULQ0 834 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 CBLCQ9ULV8 474 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 SORCS3Q9UPU3 1222 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 VWA7Q9Y334 891 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 RBM8AQ9Y5S9 174 aaKnown RBP2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 MRVI1Q9Y6F6 885 aa2.65□□□□□ -1.99
RNU6-239P-201ENST00000390990 MYADML2A6NDP7 307 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 GJB6O95452 261 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 PYGMP11217 842 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 TYRP1P17643 537 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 TAP1Q03518 808 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 TM4SF20Q53R12 229 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 NAIF1Q69YI7 327 aaPredicted RBP2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 KLHDC10Q6PID8 442 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 EEPD1Q7L9B9 569 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 MDGA1Q8NFP4 955 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 LPPQ93052 612 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 SLC7A6OSQ96CW6 309 aaPredicted RBP2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 C16orf92Q96LL3 132 aa2.64□□□□□ -1.99
RNU6-239P-201ENST00000390990 TCF25Q9BQ70 676 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms