RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 KCNG2Q9UJ96 466 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PCDHA4Q9UN74 947 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SORCS3Q9UPU3 1222 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PTPN22Q9Y2R2 807 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SH3BP1Q9Y3L3 701 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SAMM50Q9Y512 469 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PCDHB1Q9Y5F3 818 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ENTPD2Q9Y5L3 495 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SQORQ9Y6N5 450 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 FAT4Q6V0I7 4981 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 FBN1P35555 2871 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TP53BP1Q12888 1972 aaPredicted RBP-0.1□□□□□ -2.42
TRAJ28-201ENST00000390509 A0A1B0GUV1 79 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 SRRM3A6NNA2 597 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 KCNU1A8MYU2 1149 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 KLLNB2CW77 178 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 B4DGG1 531 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TCP11X1B4DZS4 312 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 E5RJQ4 531 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 FZD9O00144 591 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PPP6CO00743 305 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 MAN2B1O00754 1011 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TNFRSF10BO14763 440 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 FGF10O15520 208 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TNFRSF21O75509 655 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 FOXH1O75593 365 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ABLIM3O94929 683 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 NDUFA10O95299 355 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PRAMEF1O95521 474 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 NFATC1O95644 943 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TBC1D8O95759 1140 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 LATS1O95835 1130 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PAK4O96013 591 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 FGBP02675 491 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 APOHP02749 345 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 HMGCRP04035 888 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TUBB4AP04350 444 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 HLA-DOAP06340 250 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 GSTM1P09488 218 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ITGAMP11215 1152 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PLA2G2AP14555 144 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ARSAP15289 507 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 VAV1P15498 845 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PDE6AP16499 860 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 CEBPBP17676 345 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZBTB25P24278 435 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 DDX6P26196 483 aaKnown RBP eCLIP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 POLD1P28340 1107 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 MPGP29372 298 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 WEE1P30291 646 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 L1CAMP32004 1257 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 BMPR1AP36894 532 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 IL6STP40189 918 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF157P51786 506 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 YARSP54577 528 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ATP12AP54707 1039 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 XGP55808 180 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 KRTAP12-3P60328 96 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 KRTAP10-4P60372 401 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PMP22Q01453 160 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ILF3Q12906 894 aaKnown RBP eCLIP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 NFATC2Q13469 925 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TOP3AQ13472 1001 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 RAB33AQ14088 237 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 NOLC1Q14978 699 aaKnown RBP eCLIP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 UBXN2BQ14CS0 331 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 LRRC14Q15048 493 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 UBE3CQ15386 1083 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 SKIV2LQ15477 1246 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TRIP6Q15654 476 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZYXQ15942 572 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 LPAL2Q16609 132 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 BEAN1Q3B7T3 259 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 C8orf34Q49A92 452 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF484Q5JVG2 852 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 KIAA1755Q5JYT7 1200 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 WIPI1Q5MNZ9 446 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 KIAA0319Q5VV43 1072 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 C1QL3Q5VWW1 255 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PMS2CLQ68D20 193 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 VASNQ6EMK4 673 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 MFSD5Q6N075 450 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 PRPF40BQ6NWY9 871 aaKnown RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 LLGL2Q6P1M3 1020 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 C16orf46Q6P387 395 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF549Q6P9A3 640 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 KLHDC10Q6PID8 442 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 SHC4Q6S5L8 630 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 CRTC3Q6UUV7 619 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TMC5Q6UXY8 1006 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF782Q6ZMW2 699 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF66Q6ZN08 573 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 Q6ZNX1 250 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 STXBP4Q6ZWJ1 553 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 USP30Q70CQ3 517 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 NLRC3Q7RTR2 1065 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 TMC3Q7Z5M5 1100 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 ADIPOR2Q86V24 386 aa-0.1□□□□□ -2.43
TRAJ28-201ENST00000390509 KRTAP13-1Q8IUC0 172 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms