RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 METTL13Q8N6R0 699 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 CCDC110Q8TBZ0 833 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■■■■ 55.6
TRAPPC9-201ENST00000389328 GLG1Q92896 1179 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 TLR10Q9BXR5 811 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 NOD2Q9HC29 1040 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 TMEM131LA2VDJ0 1609 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 CD19P15391 556 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 AMPD2Q01433 879 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 BFSP1Q12934 665 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 KIAA1755Q5JYT7 1200 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 TRPM8Q7Z2W7 1104 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 SH3RF1Q7Z6J0 888 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 SDCCAG8Q86SQ7 713 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 ARMC2Q8NEN0 867 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 RFFLQ8WZ73 363 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 RBM17Q96I25 401 aaKnown RBP14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 TOM1O60784 492 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 FTLP02792 175 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 SCTRP47872 440 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 WDR59Q6PJI9 974 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 SERPINB13Q9UIV8 391 aa14.16□□□□□ -0.14
TRAPPC9-201ENST00000389328 SMIM22K7EJ46 135 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 MAPK13O15264 365 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 GAP43P17677 238 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 USP11P51784 963 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 ICA1Q05084 483 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 NAALADL2Q58DX5 795 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 AGBL2Q5U5Z8 902 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 KLHDC7AQ5VTJ3 777 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 BBOF1Q8ND07 529 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.15□□□□□ -0.144e-7■■■□□ 18.4
TRAPPC9-201ENST00000389328 RSAD2Q8WXG1 361 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 CAVIN3Q969G5 261 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 REXO2Q9Y3B8 237 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 GOLGA8IPA6NC78 632 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 GOLGA8JA6NMD2 632 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 hCG_1984214I3L0E3 225 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 STXBP3O00186 592 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 SCP2P22307 547 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 MFAP3P55082 362 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 KCTD19Q17RG1 926 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 CERKLQ49MI3 558 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 ZNF713Q8N859 430 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 NSMCE1Q8WV22 266 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 ADAM33Q9BZ11 813 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 TMBIM4Q9HC24 238 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 C1orf112Q9NSG2 853 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 MIF4GDA9UHW6 222 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 MXI1P50539 228 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 SLC29A2Q14542 456 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 LONRF1Q17RB8 773 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 SLC35G2Q8TBE7 412 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 C1orf54Q8WWF1 131 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 NT5C1BQ96P26 610 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 FGFR1OP2Q9NVK5 253 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 SCOCQ9UIL1 159 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 FAM187AA6NFU0 413 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 RAD23BP54727 409 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 C12orf60Q5U649 245 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 RNF207Q6ZRF8 634 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 DUSP9Q99956 384 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 VCX3BQ9H321 246 aa14.15□□□□□ -0.14
TRAPPC9-201ENST00000389328 CHRNA3P32297 505 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 PHBP35232 272 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 GCLMP48507 274 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 FIGNQ5HY92 759 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 LRRC34Q8IZ02 419 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 TSNARE1Q96NA8 513 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 DIS3Q9Y2L1 958 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 USH1CQ9Y6N9 552 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 USP17L10C9JJH3 530 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 LRRC37BQ96QE4 947 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 DDX20Q9UHI6 824 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 DCTN4Q9UJW0 460 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 A0A0G2JND7 137 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 TCRBV5S4A2TA0A5A2 114 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 SGK1O00141 431 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 FOSP01100 380 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 SKIP12755 728 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 GPC5P78333 572 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 BIRC2Q13490 618 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 EPM2AIP1Q7L775 607 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 SREK1Q8WXA9 508 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 OSBPL1AQ9BXW6 950 aa14.14□□□□□ -0.15
TRAPPC9-201ENST00000389328 ITSN1Q15811 1721 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 MAN1A1P33908 653 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 DOK7Q18PE1 504 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 SPATA21Q7Z572 469 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 ADGRA1Q86SQ6 560 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZC3H18Q86VM9 953 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 RPUSD2Q8IZ73 545 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 RAB3IL1Q8TBN0 382 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 CHORDC1Q9UHD1 332 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 SPAG7O75391 227 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 CDK17Q00537 523 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 XKR9Q5GH70 373 aa14.13□□□□□ -0.15
TRAPPC9-201ENST00000389328 WDR78Q5VTH9 848 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms