RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 CALCAP01258 141 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 GJB1P08034 283 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 ATP4AP20648 1035 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 CASQ1P31415 396 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 MRPS25P82663 173 aaKnown RBP11.15□□□□□ -0.62
LTN1-203ENST00000389195 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
LTN1-203ENST00000389195 TDRD12Q587J7 1177 aaKnown RBP11.15□□□□□ -0.62
LTN1-203ENST00000389195 TMTC1Q8IUR5 882 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 BAP1Q92560 729 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 C12orf42Q96LP6 360 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 ERGIC2Q96RQ1 377 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 MLXIPQ9HAP2 919 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 SALL4Q9UJQ4 1053 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 FHOD1Q9Y613 1164 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 PARP14Q460N5 1801 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 ANKRD63C9JTQ0 380 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 FBXO16Q8IX29 292 aaPredicted RBP11.15□□□□□ -0.62
LTN1-203ENST00000389195 TMEM130Q8N3G9 435 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 CCDC127Q96BQ5 260 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 INPP4AQ96PE3 977 aaPredicted RBP11.15□□□□□ -0.62
LTN1-203ENST00000389195 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.15□□□□□ -0.62
LTN1-203ENST00000389195 GOLPH3Q9H4A6 298 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 JPH1Q9HDC5 661 aaPredicted RBP11.15□□□□□ -0.62
LTN1-203ENST00000389195 FRMPD4Q14CM0 1322 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 ADGRA3Q8IWK6 1321 aa11.15□□□□□ -0.62
LTN1-203ENST00000389195 MYH10P35580 1976 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 WDR64B1ANS9 1081 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 BUB1O43683 1085 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 CSDE1O75534 798 aaKnown RBP11.15□□□□□ -0.63
LTN1-203ENST00000389195 CNMDO75829 334 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 COBLL1Q53SF7 1204 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 CCDC122Q5T0U0 273 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 LMBRD2Q68DH5 695 aaPredicted RBP11.15□□□□□ -0.63
LTN1-203ENST00000389195 ANKRD13AQ8IZ07 590 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 NEK11Q8NG66 645 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 TRAPPC12Q8WVT3 735 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 PACSIN1Q9BY11 444 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 RRAGCQ9HB90 399 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 AGPAT3Q9NRZ7 376 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 PCDHA10Q9Y5I2 948 aa11.15□□□□□ -0.63
LTN1-203ENST00000389195 PFASO15067 1338 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 GLTPD2A6NH11 291 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 EXOC3O60645 756 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 BCRP11274 1271 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 XRCC5P13010 732 aaKnown RBP11.14□□□□□ -0.63
LTN1-203ENST00000389195 ZBED6P86452 979 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 HSDL1Q3SXM5 330 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 KIAA1328Q86T90 577 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 SLC35C1Q96A29 364 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 DEF6Q9H4E7 631 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 TOPORSQ9NS56 1045 aaPredicted RBP11.14□□□□□ -0.63
LTN1-203ENST00000389195 TBC1D22BQ9NU19 505 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 TYW1Q9NV66 732 aaKnown RBP11.14□□□□□ -0.63
LTN1-203ENST00000389195 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 CHORDC1Q9UHD1 332 aaPredicted RBP11.14□□□□□ -0.63
LTN1-203ENST00000389195 ADAMTS1Q9UHI8 967 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 DICER1Q9UPY3 1922 aaKnown RBP11.14□□□□□ -0.63
LTN1-203ENST00000389195 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 TMCO5BA8MYB1 307 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 ZNF185O15231 689 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 CXCR5P32302 372 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 PSMC5P62195 406 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 PRKCEQ02156 737 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 MOGSQ13724 837 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 NOL9Q5SY16 702 aaKnown RBP11.14□□□□□ -0.63
LTN1-203ENST00000389195 HAUS6Q7Z4H7 955 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 CDR2LQ86X02 465 aaPredicted RBP11.14□□□□□ -0.63
LTN1-203ENST00000389195 ERO1BQ86YB8 467 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 FAM186BQ8IYM0 893 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 RBM46Q8TBY0 533 aaKnown RBP11.14□□□□□ -0.63
LTN1-203ENST00000389195 PLEKHO2Q8TD55 490 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 CAPZA3Q96KX2 299 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 SMARCAL1Q9NZC9 954 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
LTN1-203ENST00000389195 A0A0G2JLL6 359 aaPredicted RBP11.13□□□□□ -0.63
LTN1-203ENST00000389195 AKR1B10O60218 316 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 PON1P27169 355 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 GCLMP48507 274 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 ALDH5A1P51649 535 aaPredicted RBP11.13□□□□□ -0.63
LTN1-203ENST00000389195 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
LTN1-203ENST00000389195 ARHGAP44Q17R89 818 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 PRRT2Q7Z6L0 340 aaPredicted RBP11.13□□□□□ -0.63
LTN1-203ENST00000389195 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 GBP3Q9H0R5 595 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 PLEKHA4Q9H4M7 779 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 OLFML3Q9NRN5 406 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 GCNT4Q9P109 453 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 OTOFQ9HC10 1997 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 PDXKO00764 312 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 DYNC1I1O14576 645 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 UBA1P22314 1058 aaKnown RBP11.13□□□□□ -0.63
LTN1-203ENST00000389195 ADSSP30520 456 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 NPTX2P47972 431 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 KIF11P52732 1056 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 GRM1Q13255 1194 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 STXBP2Q15833 593 aa11.13□□□□□ -0.63
LTN1-203ENST00000389195 CBWD2Q8IUF1 395 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms