RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 ESRRAP11474 423 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-202ENST00000382381 ADD2P35612 726 aa13.84□□□□□ -0.19
ABCA3-202ENST00000382381 ZNF211Q13398 564 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-202ENST00000382381 TAF11Q15544 211 aa13.84□□□□□ -0.19
ABCA3-202ENST00000382381 ANKRD20A4Q4UJ75 823 aa13.84□□□□□ -0.19
ABCA3-202ENST00000382381 ANKRD20A8PQ5CZ79 823 aa13.84□□□□□ -0.19
ABCA3-202ENST00000382381 ANKRD20A2Q5SQ80 823 aa13.84□□□□□ -0.19
ABCA3-202ENST00000382381 ANKRD20A1Q5TYW2 823 aa13.84□□□□□ -0.19
ABCA3-202ENST00000382381 ZNF746Q6NUN9 644 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-202ENST00000382381 PPP1R36Q96LQ0 422 aa13.84□□□□□ -0.19
ABCA3-202ENST00000382381 KANSL2Q9H9L4 492 aa13.84□□□□□ -0.19
ABCA3-202ENST00000382381 SAYSD1Q9NPB0 183 aa13.84□□□□□ -0.19
ABCA3-202ENST00000382381 SCHIP1Q9P0W5 487 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-202ENST00000382381 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
ABCA3-202ENST00000382381 EPHB4P54760 987 aa13.83□□□□□ -0.19
ABCA3-202ENST00000382381 ERICH1Q86X53 443 aa13.83□□□□□ -0.19
ABCA3-202ENST00000382381 RABGGTAQ92696 567 aa13.83□□□□□ -0.19
ABCA3-202ENST00000382381 ATXN7L3BQ96GX2 97 aa13.83□□□□□ -0.19
ABCA3-202ENST00000382381 RNF26Q9BY78 433 aaPredicted RBP13.83□□□□□ -0.19
ABCA3-202ENST00000382381 CIAO1O76071 339 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 SLC8A1P32418 973 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 DAB2P98082 770 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 POU5F1BQ06416 359 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 DHTKD1Q96HY7 919 aaPredicted RBP13.83□□□□□ -0.2
ABCA3-202ENST00000382381 COPRSQ9NQ92 184 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 HPS4Q9NQG7 708 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 NEMP1O14524 444 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 GCLMP48507 274 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 ZNF507Q8TCN5 953 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 PIH1D3Q9NQM4 214 aaKnown RBP13.83□□□□□ -0.2
ABCA3-202ENST00000382381 MOCS2O96007 188 aaPredicted RBP13.83□□□□□ -0.2
ABCA3-202ENST00000382381 CRKP46108 304 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 PDCD2Q16342 344 aaPredicted RBP13.83□□□□□ -0.2
ABCA3-202ENST00000382381 PAGE5Q96GU1 130 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 RPAINQ86UA6 219 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 RNF168Q8IYW5 571 aaPredicted RBP13.83□□□□□ -0.2
ABCA3-202ENST00000382381 LINC00301Q8NCQ3 95 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 FBXO41Q8TF61 875 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 FMO2Q99518 471 aa13.83□□□□□ -0.2
ABCA3-202ENST00000382381 MMTAG2Q9BU76 263 aaKnown RBP13.83□□□□□ -0.2
ABCA3-202ENST00000382381 RAVER2Q9HCJ3 691 aaKnown RBP13.83□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L15C9J2P7 530 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L13C9JLJ4 530 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L11C9JVI0 530 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L18D6R9N7 530 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L22D6RA61 530 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L17D6RBQ6 530 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L19D6RCP7 530 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L20D6RJB6 530 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L24Q0WX57 530 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 USP17L6PQ6QN14 398 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 ABCB6Q9NP58 842 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 FBXL5Q9UKA1 691 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 MINPP1Q9UNW1 487 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 HSPA4LO95757 839 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 MYL1P05976 194 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 TBCCQ15814 346 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 C1orf228Q6PIY5 440 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 SLC44A5Q8NCS7 719 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 KCNV2Q8TDN2 545 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 RNF25Q96BH1 459 aaPredicted RBP13.82□□□□□ -0.2
ABCA3-202ENST00000382381 CCDC17Q96LX7 622 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 WDR11Q9BZH6 1224 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 VPS11Q9H270 941 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 GTSE1Q9NYZ3 720 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 NDUFA10O95299 355 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 SETSIPP0DME0 302 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 EEF1DP29692 281 aaKnown RBP13.82□□□□□ -0.2
ABCA3-202ENST00000382381 ARHGDIAP52565 204 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.82□□□□□ -0.2
ABCA3-202ENST00000382381 NDST4Q9H3R1 872 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 MRPL47Q9HD33 250 aaKnown RBP13.82□□□□□ -0.2
ABCA3-202ENST00000382381 PPARGC1AQ9UBK2 798 aaKnown RBP13.82□□□□□ -0.2
ABCA3-202ENST00000382381 ANAPC7Q9UJX3 599 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 TULP4Q9NRJ4 1543 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 GAP43P17677 238 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 RASGRF1Q13972 1273 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 SNX19Q92543 992 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 TRAIPQ9BWF2 469 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 KLHL8Q9P2G9 620 aaPredicted RBP13.82□□□□□ -0.2
ABCA3-202ENST00000382381 KIF24Q5T7B8 1368 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 PPP6R2O75170 966 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 SOX11P35716 441 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 CDK8P49336 464 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 VCPP55072 806 aaKnown RBP13.82□□□□□ -0.2
ABCA3-202ENST00000382381 TMPRSS15P98073 1019 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 DCTN4Q9UJW0 460 aa13.82□□□□□ -0.2
ABCA3-202ENST00000382381 CDK12Q9NYV4 1490 aaPredicted RBP13.82□□□□□ -0.2
ABCA3-202ENST00000382381 SLFN14P0C7P3 912 aa13.81□□□□□ -0.2
ABCA3-202ENST00000382381 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
ABCA3-202ENST00000382381 ACCSLQ4AC99 568 aa13.81□□□□□ -0.2
ABCA3-202ENST00000382381 GLE1Q53GS7 698 aaKnown RBP13.81□□□□□ -0.2
ABCA3-202ENST00000382381 ALKBH5Q6P6C2 394 aaKnown RBP13.81□□□□□ -0.2
ABCA3-202ENST00000382381 CCNYL1Q8N7R7 359 aa13.81□□□□□ -0.2
ABCA3-202ENST00000382381 DYDC2Q96IM9 177 aa13.81□□□□□ -0.2
ABCA3-202ENST00000382381 WRNIP1Q96S55 665 aa13.81□□□□□ -0.2
ABCA3-202ENST00000382381 SH2D3AQ9BRG2 576 aa13.81□□□□□ -0.2
ABCA3-202ENST00000382381 EPC1Q9H2F5 836 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms