RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 RSAD2Q8WXG1 361 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 SAAL1Q96ER3 474 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 RNF14Q9UBS8 474 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 ARHGEF6Q15052 776 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 DENND2CQ68D51 928 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 PPP1R2P3Q6NXS1 205 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 CYFIP1Q7L576 1253 aa13.25□□□□□ -0.29
GABPB1-203ENST00000380877 CCDC117Q8IWD4 279 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-203ENST00000380877 CTNNA1P35221 906 aaKnown RBP13.24□□□□□ -0.29
GABPB1-203ENST00000380877 STAT5BP51692 787 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 LLGL1Q15334 1064 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 FAM193BQ96PV7 902 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-203ENST00000380877 IDI2Q9BXS1 227 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 MRPL47Q9HD33 250 aaKnown RBP13.24□□□□□ -0.29
GABPB1-203ENST00000380877 ASB14A6NK59 587 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 USP27XA6NNY8 438 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 PHKA2P46019 1235 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 ZNF568Q3ZCX4 644 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 XKR3Q5GH77 459 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 KAZNQ674X7 775 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 FRMD5Q7Z6J6 570 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 FAM83AQ86UY5 434 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 ZNF148Q9UQR1 794 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 GAKO14976 1311 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 GGPS1O95749 300 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 ICAM1P05362 532 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 RHBDL3P58872 404 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 DNAJC24Q6P3W2 148 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 RASGRP2Q7LDG7 609 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 RHPN2Q8IUC4 686 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 ZNF668Q96K58 619 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-203ENST00000380877 PSMD1Q99460 953 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 KCNH7Q9NS40 1196 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 DGAT1O75907 488 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 INPP5BP32019 993 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 ZBTB16Q05516 673 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 MYO1EQ12965 1108 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 C7orf31Q8N865 590 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 ANKS1AQ92625 1134 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 DISP2A7MBM2 1401 aa13.24□□□□□ -0.29
GABPB1-203ENST00000380877 TXNP10599 105 aaKnown RBP13.23□□□□□ -0.29
GABPB1-203ENST00000380877 SPOUT1Q5T280 376 aaKnown RBP13.23□□□□□ -0.29
GABPB1-203ENST00000380877 GMCL1P1Q8NEA9 526 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 FAM149B1Q96BN6 582 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 EDEM3Q9BZQ6 932 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 CAPN11Q9UMQ6 739 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 NDC80O14777 642 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 MSH4O15457 936 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 ZMYND10O75800 440 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 BFSP1Q12934 665 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 NFX1Q12986 1120 aaKnown RBP13.23□□□□□ -0.29
GABPB1-203ENST00000380877 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 IL17RAQ96F46 866 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 TBC1D8O95759 1140 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 PPARDQ03181 441 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 GFPT1Q06210 699 aaPredicted RBP13.23□□□□□ -0.29
GABPB1-203ENST00000380877 DRAP1Q14919 205 aaPredicted RBP13.23□□□□□ -0.29
GABPB1-203ENST00000380877 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 CRY2Q49AN0 593 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 KRT39Q6A163 491 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 KCNV1Q6PIU1 500 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 PHLDB2Q86SQ0 1253 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 CATSPER3Q86XQ3 398 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 ANKRD13AQ8IZ07 590 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 C2orf40Q9H1Z8 148 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 SNX25Q9H3E2 840 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 SAMD15Q9P1V8 674 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 MED7O43513 233 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 HEXIM1O94992 359 aaKnown RBP13.23□□□□□ -0.29
GABPB1-203ENST00000380877 VIMP08670 466 aaKnown RBP13.23□□□□□ -0.29
GABPB1-203ENST00000380877 MTF1Q14872 753 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 NR1I3Q14994 352 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 RHOT2Q8IXI1 618 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 PBKQ96KB5 322 aa13.23□□□□□ -0.29
GABPB1-203ENST00000380877 PITPNM2Q9BZ72 1349 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 ZSCAN20P17040 1043 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 EARS2Q5JPH6 523 aaKnown RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 CEP85LQ5SZL2 805 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 NBPF12Q5TAG4 269 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 RBM43Q6ZSC3 357 aaKnown RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 TRIM50Q86XT4 487 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 TAAR1Q96RJ0 339 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 TIPINQ9BVW5 301 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 INTS2Q9H0H0 1204 aaKnown RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 KCND2Q9NZV8 630 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 TTLL3Q9Y4R7 772 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 EMSYQ7Z589 1322 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 PASKQ96RG2 1323 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 CHD2O14647 1828 aaKnown RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 NDUFAB1O14561 156 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 MMP14P50281 582 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 SNAPC2Q13487 334 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 COL9A3Q14050 684 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-203ENST00000380877 ZNF394Q53GI3 561 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 MAP7D3Q8IWC1 876 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 VPS37BQ9H9H4 285 aa13.22□□□□□ -0.29
GABPB1-203ENST00000380877 PABPN1LA6NDY0 278 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms