RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CLIC2O15247 247 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 GNA14O95837 355 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 DGKZQ13574 1117 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 HYIQ5T013 277 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 ALKBH5Q6P6C2 394 aaKnown RBP17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 WHAMMQ8TF30 809 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 REEP2Q9BRK0 252 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 CELF4Q9BZC1 486 aaKnown RBP17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 DNM3Q9UQ16 869 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 SART1O43290 800 aaKnown RBP17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 POLD1P28340 1107 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 USP11P51784 963 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 KSR1Q8IVT5 923 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 BCCIPQ9P287 314 aaKnown RBP eCLIP17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 MYO3BQ8WXR4 1341 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 KDM3AQ9Y4C1 1321 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 DCDC2CA8MYV0 355 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 HSPA9P38646 679 aaKnown RBP17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 FOXR2Q6PJQ5 311 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 MMS22LQ6ZRQ5 1243 aa17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 ZNF70Q9UC06 446 aaPredicted RBP17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 ARMCX3Q9UH62 379 aaPredicted RBP17.73■□□□□ 0.43
NKX3-1-201ENST00000380871 E7EVH7 732 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 EML1O00423 815 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 MSH4O15457 936 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 TMOD1P28289 359 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 HNRNPH1P31943 449 aaKnown RBP17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 MDH1P40925 334 aaKnown RBP17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 STAT2P52630 851 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 EXOC3L4Q17RC7 722 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 MYCBPAPQ8TBZ2 947 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 CCT8L2Q96SF2 557 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 SH2D3AQ9BRG2 576 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 ISCUQ9H1K1 167 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 KCNMB3Q9NPA1 279 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 UTRNP46939 3433 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 ZBTB48P10074 688 aaPredicted RBP17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 GIT2Q14161 759 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 TBC1D10BQ4KMP7 808 aaPredicted RBP17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 ARHGAP27Q6ZUM4 889 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 SCFD2Q8WU76 684 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 ARHGEF10LQ9HCE6 1279 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 SLX4Q8IY92 1834 aa17.72■□□□□ 0.43
NKX3-1-201ENST00000380871 DAPK3O43293 454 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 COPB2P35606 906 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 NLRP14Q86W24 1093 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 CD302Q8IX05 232 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 TPCN2Q8NHX9 752 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 TRIM31Q9BZY9 425 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 ZBTB21Q9ULJ3 1066 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 NR2E1Q9Y466 385 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 SCN9AQ15858 1988 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 H0YGN5 161 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 CTNNA1P35221 906 aaKnown RBP17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 ZNF844Q08AG5 666 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 ADAT2Q7Z6V5 191 aaKnown RBP17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 ZC3H3Q8IXZ2 948 aaKnown RBP17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 OTUD6BQ8N6M0 293 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 TTLL6Q8N841 843 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 TMBIM4Q9HC24 238 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 NFS1Q9Y697 457 aa17.71■□□□□ 0.43
NKX3-1-201ENST00000380871 OPLAHO14841 1288 aa17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 TTI1O43156 1089 aa17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 GCNT3O95395 438 aa17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 AFPP02771 609 aaKnown RBP17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 DPEP1P16444 411 aa17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 RNF187Q5TA31 235 aaPredicted RBP17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 ERMNQ8TAM6 284 aa17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 UBLCP1Q8WVY7 318 aaPredicted RBP17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 OSGEPQ9NPF4 335 aa17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 FBXL5Q9UKA1 691 aa17.71■□□□□ 0.42
NKX3-1-201ENST00000380871 FRMD3A2A2Y4 597 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 KRIT1O00522 736 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 MEFVO15553 781 aaPredicted RBP17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 XRCC5P13010 732 aaKnown RBP17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 SPIRE1Q08AE8 756 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 SLFN12Q8IYM2 578 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 C7orf43Q8WVR3 580 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 DPH5Q9H2P9 285 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 SIX2Q9NPC8 291 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 PCDHB13Q9Y5F0 798 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 GFPT2O94808 682 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 IFT88Q13099 833 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 KNOP1Q1ED39 458 aaKnown RBP17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 EDRF1Q3B7T1 1238 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 NBPF9Q3BBW0 867 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 CHADLQ6NUI6 762 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 PEX26Q7Z412 305 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 GCNT4Q9P109 453 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
NKX3-1-201ENST00000380871 PGRMC1O00264 195 aaKnown RBP17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 DDX3XO00571 662 aaKnown RBP eCLIP17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 KIAA0754O94854 1291 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 SPATA31C1P0DKV0 1188 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 EPHA7Q15375 998 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 RSBN1LQ6PCB5 846 aaPredicted RBP17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 B4GALNT4Q76KP1 1039 aa17.69■□□□□ 0.42
NKX3-1-201ENST00000380871 DAAM2Q86T65 1068 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 366 ms