RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 ZNF365Q70YC5 407 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 MIGA2Q7L4E1 593 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 CPLX4Q7Z7G2 160 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 GPIHBP1Q8IV16 184 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 SYT2Q8N9I0 419 aaPredicted RBP7.11□□□□□ -1.27
RIPK1-202ENST00000380409 NCOA7Q8NI08 942 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 ZNF507Q8TCN5 953 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 FBF1Q8TES7 1133 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 UPF1Q92900 1129 aaKnown RBP eCLIP7.11□□□□□ -1.277e-6■■■■□ 24.4
RIPK1-202ENST00000380409 LRRC27Q9C0I9 530 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 RBM38Q9H0Z9 239 aaKnown RBP7.11□□□□□ -1.27
RIPK1-202ENST00000380409 NEUROG2Q9H2A3 272 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 MRPL46Q9H2W6 279 aaKnown RBP7.11□□□□□ -1.27
RIPK1-202ENST00000380409 NRDE2Q9H7Z3 1164 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 PTTG2Q9NZH5 202 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 ZNHIT2Q9UHR6 403 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 DIS3Q9Y2L1 958 aaKnown RBP7.11□□□□□ -1.27
RIPK1-202ENST00000380409 DUSP10Q9Y6W6 482 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 BCORQ6W2J9 1755 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 TECPR2O15040 1411 aa7.11□□□□□ -1.27
RIPK1-202ENST00000380409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 DCAF8L1A6NGE4 600 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 TBC1D12O60347 775 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 KRT18P05783 430 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 TCP1P17987 556 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 PDIA3P30101 505 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 CLCN2P51788 898 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 KRT31Q15323 416 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 WDR72Q3MJ13 1102 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 BEND3Q5T5X7 828 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 SOGA3Q5TF21 947 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 HOOK3Q86VS8 718 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 KBTBD2Q8IY47 623 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 OR2W6PQ8NHA6 318 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 FNDC8Q8TC99 324 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 TAF4BQ92750 862 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 HIC2Q96JB3 615 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 TLR10Q9BXR5 811 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 SMARCAL1Q9NZC9 954 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 IL1RAPL1Q9NZN1 696 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 CAPN11Q9UMQ6 739 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 PKD1L3Q7Z443 1732 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 BOLA2-SMG1P6H3BVE0 249 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 LSM1O15116 133 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 KRT86O43790 486 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 ATP9AO75110 1047 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 HEXIM1O94992 359 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 LYNP07948 512 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 GSTT2P0CG29 244 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 GSTT2BP0CG30 244 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 TMEM259Q4ZIN3 620 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 ZSCAN29Q8IWY8 852 aaPredicted RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 CYP4X1Q8N118 509 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 UHMK1Q8TAS1 419 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 USP33Q8TEY7 942 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 IFT81Q8WYA0 676 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 KLHL29Q96CT2 875 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 DDX27Q96GQ7 796 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 MKNK2Q9HBH9 465 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 ARHGEF38Q9NXL2 777 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 ATF5Q9Y2D1 282 aaPredicted RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 HYOU1Q9Y4L1 999 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 TOPAZ1Q8N9V7 1692 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 CCDC88AQ3V6T2 1871 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 GRID2IPA4D2P6 1211 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 NVLO15381 856 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 PJA2O43164 708 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 PRDM1O75626 825 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 ZBTB7AO95365 584 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 PARNO95453 639 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 VHLP40337 213 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 EPS15P42566 896 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 MAGOHP61326 146 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 ERVK-9P63128 1117 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 KCNC4Q03721 635 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 DHX9Q08211 1270 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 KPNB1Q14974 876 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 SPDYAQ5MJ70 313 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 RNF43Q68DV7 783 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 NFRKBQ6P4R8 1299 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 UNC13DQ70J99 1090 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 CCDC65Q8IXS2 484 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 RBM46Q8TBY0 533 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 MORC4Q8TE76 937 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 INPP5DQ92835 1189 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 MAGOHBQ96A72 148 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 NLRP3Q96P20 1036 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 PLIN2Q99541 437 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 METTL14Q9HCE5 456 aaKnown RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 MAGEC2Q9UBF1 373 aaPredicted RBP7.1□□□□□ -1.27
RIPK1-202ENST00000380409 RABL2BQ9UNT1 228 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 CHMP2BQ9UQN3 213 aa7.1□□□□□ -1.27
RIPK1-202ENST00000380409 USP6P35125 1406 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 A0A1W2PQC6 194 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 ESYT3A0FGR9 886 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 BBOX1O75936 387 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 CHN1P15882 459 aa7.09□□□□□ -1.27
RIPK1-202ENST00000380409 CCT6AP40227 531 aaKnown RBP7.09□□□□□ -1.27
RIPK1-202ENST00000380409 CTDSPL2Q05D32 466 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms