RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SART1O43290 800 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 NMT1P30419 496 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 RWDD2BP57060 319 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 COG2Q14746 738 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 FIGNQ5HY92 759 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 ANKS1AQ92625 1134 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 ATP6V1G3Q96LB4 118 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 FAM167BQ9BTA0 163 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 RIOX1Q9H6W3 641 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 MAGEF1Q9HAY2 307 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 ATP8A1Q9Y2Q0 1164 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 PNMA6FA0A0J9YX94 578 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 GMNCA6NCL1 334 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 PHF20L1A8MW92 1017 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 MGRN1O60291 552 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 TTLL1O95922 423 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 XRCC5P13010 732 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 ZNF543Q08ER8 600 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 IFFO1Q0D2I5 559 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 ITGB3BPQ13352 177 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 DRP2Q13474 957 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 NAB2Q15742 525 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 CATSPER3Q86XQ3 398 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 NOVA2Q9UNW9 492 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-202ENST00000380281 AKAP3O75969 853 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 UCHL3P15374 230 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 SLCO1A2P46721 670 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 PPP4CP60510 307 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 ASTE1Q2TB18 679 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 ZNF746Q6NUN9 644 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 METTL13Q8N6R0 699 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 MAGEC3Q8TD91 643 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 HOOK2Q96ED9 719 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 GCNT4Q9P109 453 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 KRT13P13646 458 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 KRT71Q3SY84 523 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 ARSHQ5FYA8 562 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 PHLDB2Q86SQ0 1253 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 ANO3Q9BYT9 981 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 RIC8AQ9NPQ8 531 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 TMOD4Q9NZQ9 345 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 FBXL5Q9UKA1 691 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 CFBP00751 764 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 SERPINB2P05120 415 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 TNNC1P63316 161 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 XRCC4Q13426 336 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 SEPT2Q15019 361 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 TBC1D1Q86TI0 1168 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 CACNA2D3Q8IZS8 1091 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 C3orf20Q8ND61 904 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 TBC1D16Q8TBP0 767 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 GLG1Q92896 1179 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 ZNF570Q96NI8 536 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 P2RX7Q99572 595 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 ZC3H12CQ9C0D7 883 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 ZCWPW1Q9H0M4 648 aa13.53□□□□□ -0.24
PRPF40B-202ENST00000380281 SPATA31A5Q5VU36 1347 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 SPATA31A7Q8IWB4 1347 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 SNED1Q8TER0 1413 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 ANKRD36CQ5JPF3 1778 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 DIAPH2O60879 1101 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 PECAM1P16284 738 aaPredicted RBP13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 HNRNPH3P31942 346 aaKnown RBP13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 RPS6KA3P51812 740 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 CDK17Q00537 523 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 MIS18BP1Q6P0N0 1132 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 TRIM59Q8IWR1 403 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 USP38Q8NB14 1042 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 CAVIN3Q969G5 261 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 CDCA7Q9BWT1 371 aaPredicted RBP13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 PCIF1Q9H4Z3 704 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 DNM3Q9UQ16 869 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 C15orf41Q9Y2V0 281 aa13.52□□□□□ -0.24
PRPF40B-202ENST00000380281 ZBTB5O15062 677 aa13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 FGGP02679 453 aa13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 EEF2P13639 858 aaKnown RBP13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 ICA1Q05084 483 aa13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 ADCY1Q08828 1119 aa13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 CDC37Q16543 378 aaPredicted RBP13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 ZC3H12AQ5D1E8 599 aaKnown RBP13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 CCDC25Q86WR0 208 aa13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 CERS5Q8N5B7 392 aa13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 DHX36Q9H2U1 1008 aaKnown RBP13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 ACP6Q9NPH0 428 aa13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 DNAJC17Q9NVM6 304 aaKnown RBP13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 GGT7Q9UJ14 662 aa13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 NOC2LQ9Y3T9 749 aaKnown RBP13.52□□□□□ -0.25
PRPF40B-202ENST00000380281 DOT1LQ8TEK3 1739 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 TBCAO75347 108 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 HSD17B3P37058 310 aa13.51□□□□□ -0.25
PRPF40B-202ENST00000380281 PPP1R2P41236 205 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms